Candidatus Desulfobacillus denitrificans: DSYM_16730
Help
Entry
DSYM_16730 CDS
T07109
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddz03009
]
DSYM_16730
Enzymes [BR:
ddz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DSYM_16730
Ribosome biogenesis [BR:
ddz03009
]
Prokaryotic type
ribosomal protein modification factors
DSYM_16730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
BBO20974
UniProt:
A0A809SAL1
LinkDB
All DBs
Position
complement(1681558..1682886)
Genome browser
AA seq
442 aa
AA seq
DB search
MPSKKAVQPKVGFVSLGCPKALVDSEHILTRLRAEGYDVVPDYEGADLVVVNTCGFIDAA
VAESLDAIGEALDENGRVIVTGCLGAKEDVVLAAHPQVLAVTGPHATEQVMQEVHKHLPK
PHDPFEDLVPPQGIKLTPRHYAYLKISEGCNHRCTFCIIPSLRGDLVSRPIGEVLREAEK
LVDAGVKELLVVSQDTSAYGVDLKYRTGFWGGKPVKTRLYELAQALGELGVWVRLHYVYP
YPSVDDLIPLMAEGKILPYLDVPFQHASPRILKLMKRPASAENVLARVRAWRAVCPELTI
RSTFITGFPGETDADFEMLLQFLEEARLDRVGAFAYSPVDGAEANRLPDPVPETLREERR
SRLMELQEDISTQRLEQKIGREIEVLVEEVDEEGAIARSQADAPEIDGLVHIPDGGHLEV
GEFARVRVTDCDVHDLYAEVIE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaagaaagctgttcagcccaaggtcggcttcgtctcactcggctgtccgaaa
gccctcgtcgattccgagcacatcctgacgcgcctgcgcgccgagggctacgacgtcgtg
cccgactacgagggcgccgacctcgtcgtggtgaacacctgcggcttcatcgacgccgcg
gtggccgaatcgctcgacgccatcggcgaggcgctcgacgagaacggccgcgtcatcgtc
accggctgcctcggcgccaaggaggacgtggtgctggcggcccatccgcaggtgctcgcg
gtcaccggcccgcatgccaccgagcaggtcatgcaggaagtgcacaagcatctgcccaag
ccgcacgatcccttcgaggacctggtgcccccgcagggcatcaagctgacgccgcggcac
tatgcgtatctcaagatttccgagggctgcaaccaccgctgcaccttctgcatcatcccc
tcgctgcgcggcgacctcgtcagccggcccatcggcgaggtcttgcgcgaggccgagaag
ctggtcgatgcgggcgtgaaggaactgctcgtcgtctcgcaggacaccagcgcctacggc
gtcgatctcaagtaccgcaccggcttctggggcggcaagcccgtcaagacgcgcctctac
gaactggcgcaggcgctgggcgagctgggcgtctgggtgcgcctgcactacgtctatccc
tatcccagcgtggacgacctgatcccgctgatggccgagggcaagatcctgccctacctc
gacgtgcccttccagcacgccagcccgcgcatcctcaagctgatgaagcggccggccagc
gccgagaacgtgctggcgcgcgtgcgcgcctggcgcgccgtctgcccggaactgactatt
cgcagcactttcatcaccggctttcccggcgagaccgatgcggacttcgagatgctgctg
cagtttctcgaggaagcccggctcgaccgtgtcggcgcctttgcctattcccccgtcgac
ggcgccgaggccaaccggctgcccgacccggtgccggagacgctgcgcgaggagcgccgc
agccgcctgatggaactgcaggaggacatcagcacgcagcggctggagcagaagatcggc
cgcgagatcgaggtgctggtcgaggaggtcgacgaggaaggcgccatcgcccgcagccag
gccgacgcgccggaaatcgacggcctggtgcacattccggacggtgggcatctcgaagtc
ggcgagttcgcccgcgtgcgcgtcaccgactgcgacgtgcacgacctctatgccgaggtg
atcgagtga
DBGET
integrated database retrieval system
