Devosia ginsengisoli: FPZ08_05685
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Entry
FPZ08_05685 CDS
T06120
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
dea
Devosia ginsengisoli
Pathway
dea00190
Oxidative phosphorylation
dea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FPZ08_05685
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPZ08_05685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dea03019
]
FPZ08_05685
Enzymes [BR:
dea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
FPZ08_05685
Messenger RNA biogenesis [BR:
dea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FPZ08_05685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
QDZ10282
UniProt:
A0A5B8LRW0
LinkDB
All DBs
Position
complement(1175592..1177760)
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AA seq
722 aa
AA seq
DB search
MNEMSEFADTEVSVPDVEALRSSPARFVNREVSWLQFNMRVLEEAGNLNHPLLERLRFVS
ISANNLDEFYMVRVAGLKGQMRAGLTRQSADGLTPAEQMEEIATLAQHLQLEQQDHWQNL
REELFAQNVVIHEADDLSTDQVNYLQKLFREEIFPVLTPIAVDPAHPFPFIPNLGLALAF
ELKRPDNDLPLTALVRIPGNLDRFITLPTGLVSEGRSEVVTIDTLVKLFFHKMFPGHEVV
GSGAFRIIRDSEIEIDDEAADLVVEFETALRQRRRGQVIRFEIESSMPRALKRQISEQLG
VTESEVFEVQGFLGLADARKVCDLERPDLKFTPYHARFPERIRDYSGDSFAAIRAKDILV
HHPFESFDVVAQFLMQAARDPDVVAIKQTLYRTSADSPIIKALVLAAEAGKSVTCLVELK
ARFDEEANIRWARDLERAGAQVVFGFIELKTHAKLSQVVRREKGKLVSYCHIGTGNYHPI
TAKIYTDLSYFTIDPAITRDVARVFNFITGYARPTELETIAVSPVNLRQRLLDDIAREIE
LAGKGQPASVLLKMNSLVDPEIIDALYDASQAGVKVDLIVRGICCLRPGIPGFSDNIRVK
SVVGRFLEHSRIYCFGNGDAMPNPRAKVYISSADLMGRNLDGRVEVMVPILNNTVHKQIL
DRILVAYLRDNQQSWEVLPDGSSHRVRPAEGEELFNAHDYFMTNPSLSGRGSAGGEGEEG
LA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagatgagcgagttcgccgataccgaagtctcggtccccgatgtcgaggcgctg
cgcagcagcccggcgcgcttcgtcaatcgcgaggtgagctggctgcaattcaacatgcgc
gtgctggaagaggcgggcaacctcaaccatccgctgctagagcggctgcgcttcgtctcc
atttcggccaacaatctcgatgaattctacatggtgcgcgtcgccgggctcaaagggcag
atgcgagcagggctgacgcggcagagcgccgacgggctgacgccggccgagcagatggaa
gagatcgccacgctggcccagcacctgcaactggagcagcaggatcattggcagaacctg
cgcgaggaactgtttgcgcagaatgtggtgatccacgaagcggatgatctcagcaccgac
caggtcaactacctgcagaagctgttccgtgaggaaatcttcccggtgctgacgccgatt
gcggtggacccggcgcatcccttcccgttcatccccaatctggggctggcgctggcgttc
gagctgaagcggccggacaatgacctgccgctgaccgctttggtgcgcattcccggcaat
ctcgatcgtttcatcacgctgccgaccgggctggtttcggaagggcgcagcgaagtggtg
accatcgacacgctggtcaaactgttcttccacaagatgtttcccggccatgaagtggtc
ggctccggcgccttccgcatcattcgcgacagcgaaatcgaaatcgacgacgaggcggcg
gacctggtggtggagttcgagacggcgttgcggcagcggcggcgcgggcaggtgatccgg
ttcgagatcgagagctcgatgccgcgcgcgctcaagcggcagatcagcgagcagctcgga
gtcacggaaagcgaagtgttcgaggtgcagggctttctgggcctggccgatgcgcgcaag
gtctgcgacctggagcggccggacctcaagttcacgccctatcatgcgcgcttccccgag
cgcatccgcgactatagcggggacagttttgcggcgatccgggccaaggatatcctggtg
catcacccgttcgagagtttcgacgtggtggcgcagttcctgatgcaggcggcgcgtgac
cccgacgtggtggctatcaagcagacgctctatcgcacgtcggccgacagcccgatcatc
aaggcgctggtgctggcggcagaagccggcaagtcggtgacgtgcctggtggagctcaag
gcgcggtttgacgaggaagccaatatccgctgggcacgcgacctggaacgggccggggcg
caggtggtgttcggcttcatcgagctgaagacccatgccaagctgagccaggtggtgcgg
cgcgaaaagggcaagctggtgagctattgccatatcggcaccggcaattaccacccgatt
acggccaagatttataccgacctcagctatttcaccatcgacccggccatcacgcgggat
gtggcgcgggtgttcaacttcatcactggctatgcgcggccgaccgaactcgagacgatc
gcggtctcgccggtcaacctgcggcagcgcctgctggacgatattgcgcgcgaaatcgag
ctggccggcaagggccagccggccagcgtgctgctcaagatgaactcgctggtcgaccct
gagatcatcgatgcgctttatgacgccagccaggccggcgtgaaggtcgatctcatcgtg
cgcggtatttgctgcctgcggccgggcattcccggattttccgacaatatcagggtgaaa
tcggtggtcgggcggttcctcgaacacagccgcatctactgtttcggcaatggcgatgcg
atgcccaatccacgcgccaaagtgtatatttcatcggccgacctgatgggccggaacctg
gacggccgcgtcgaagtgatggtgccgatcctcaacaacaccgtgcataaacagattctg
gaccggattctggttgcctatctgcgcgataatcagcagagctgggaagtactgcccgat
ggcagttcgcatcgcgtgcgcccggccgaaggggaagaactcttcaacgcgcatgattac
ttcatgaccaatccgtcgctgtcgggacgcggcagtgccggcggcgaaggcgaagagggc
ctggcttga
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