Dechloromonas sp. TW-R-39-2: GBK02_11050
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Entry
GBK02_11050 CDS
T08942
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dech03009
]
GBK02_11050 (rimO)
Enzymes [BR:
dech01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GBK02_11050 (rimO)
Ribosome biogenesis [BR:
dech03009
]
Prokaryotic type
ribosomal protein modification factors
GBK02_11050 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QRM19901
UniProt:
A0A974SWJ3
LinkDB
All DBs
Position
complement(2296857..2298179)
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AA seq
440 aa
AA seq
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MHNIEKVPTVGFVSLGCPKASSDAERILTKLRAEGYEISPSYENSDLVIVNTCGFIDAAV
EESLDAIGEALNENGKVIVTGCLGAKGDIVQNTHPSVLAVTGPHSADEVMGYVHSHLPKP
HDPYSDLVPAQGVRLTPDHFAYLKISEGCNHSCTFCIIPSLRGPLVSRPVGDVLAEAENL
ARAGVKEILVISQDTSAYGVDLKYRTAFWGGKPVKSRLKELCEALASFGIWVRLHYVYPY
PSVDDVIPLMAEGKILPYLDVPFQHASPKILKAMKRPASAENTLERIAKWREICPEIVIR
STFITGFPGETEEDFDQLIQFLEDAKLDRVGAFAYSPVEGAKANELGLLLPESVREDRRR
WLMQVQEDISAAKLEAKIDTTIQVLVDAVDEEGTIARSKADAPEIDGLVYIDGYFDAQPG
DFLQVKVVDADHHDLFAQPV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcataacatcgaaaaagtgccgaccgtcggcttcgtttcactcggttgcccaaaggct
tcctcggacgctgagcgcatcctgaccaagctgcgcgccgaaggttacgaaatctcgccg
agctacgagaattccgacctggtgatcgtcaatacctgtggcttcatcgacgctgccgtc
gaggaatcgctcgacgccatcggcgaggcgctcaacgaaaacggcaaggtcattgtcacc
ggctgcctcggtgccaagggcgacatcgtgcagaacacccatccgtccgtgctcgccgtg
actggcccgcattccgccgacgaagtgatgggttacgtacatagccacctgcccaagccg
cacgatccgtacagcgatctggtcccggcccagggcgtgcgtctgacgccggatcacttt
gcctatttgaagatttccgaaggctgcaaccatagttgcaccttctgcatcatcccgtcg
ctgcgcggtccgctggtgtcgcgtccggttggcgatgtattggccgaggccgagaatctg
gcccgcgccggcgtcaaggaaatcctcgtcatctcgcaggacacctcggcctatggcgtc
gatctcaagtaccgcaccgccttctggggcggcaagccggtcaagagccggctcaaggaa
ctgtgcgaggcactggccagcttcggcatctgggttcgcctgcattacgtttatccctac
ccgtcggtcgatgatgtcattccgctgatggccgaaggcaagatcctgccttacctcgat
gtgccattccagcacgccagcccgaagatcctgaaggcgatgaaacgtccggcctcggcc
gagaacacactggaacgcatcgccaagtggcgcgaaatctgtccggaaatcgtcattcgc
tcgaccttcatcaccggcttccccggcgaaacggaagaggatttcgaccagctgatccag
ttcctcgaagatgccaagctcgaccgcgtcggtgcctttgcctattcgccggttgaaggt
gccaaggccaacgaactcggcctgctcctgccggaaagcgtgcgcgaagaccgccgtcgc
tggctgatgcaggttcaggaagacatttctgcggccaagctcgaagccaagatcgacacc
accatccaggtgctggtcgacgcggtggatgaagaaggcacgattgcccgctccaaggcc
gatgcaccagaaatcgacggcctggtgtacatcgacggctatttcgatgcccagccgggc
gatttcctgcaagtgaaggttgtcgacgccgaccatcatgacctcttcgcccagcctgtc
tga
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