Desulfoluna limicola: DSLASN_37150
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Entry
DSLASN_37150 CDS
T07859
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dek03009
]
DSLASN_37150 (rimO)
Enzymes [BR:
dek01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DSLASN_37150 (rimO)
Ribosome biogenesis [BR:
dek03009
]
Prokaryotic type
ribosomal protein modification factors
DSLASN_37150 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BCS98083
LinkDB
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Position
complement(4717490..4718824)
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AA seq
444 aa
AA seq
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MNIYLVSLGCARNLVDSEVMLGHLIEASCNIIDSPEAADVIIVNTCSFITSAVDESIDTI
LDMSEYKINGSCRYLVVAGCLPERFREEAAPELPEVDLFIGTGGYERIAEEINKLMAVDG
RIGKATCVLPDPNSVSPARTHSPRVTTTGPLAYLKVAEGCSRHCTYCIIPSLRGKYRSRS
IEDITAEAKRLLDGGVQELNLVAESTTDYGEDLGQPGKLAEVLEALSEQAPGKWIRFLYA
FPDTLDDATIKLTAEKENICAYYDIPIQHASDAIIKKMGRHYTQEDLRTLFARLRRDVPG
VALRTTVIVGFPGETEEHFQDLLDFITEVEFDHLGVFTYSDSEEQASHKLPGHVDEEIAQ
KRQDMIMAAQEEISAIRNMGRVGEVYQVLIEENPEEGSYIGRTFFQAPEVDGVTFVYGEG
LTIGSFVDVRITDAIVYDLSGEVV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttacctggtcagcctcggttgcgcccgcaacctcgtcgacagcgaagtgatg
ctgggccacctcatcgaggccagttgcaacattatcgattcaccggaagctgcagatgtc
attattgtcaacacctgcagctttattacgtccgccgtggacgagtccattgatacgatt
ctggacatgtcggaatacaagatcaacgggagctgccgctatctggtggttgccggttgc
cttcccgagcgtttccgtgaggaggccgccccggaacttcccgaagtggacctgttcatc
ggcaccggtgggtacgagcggatcgccgaggagatcaacaagcttatggctgtggacgga
cgcatcggaaaggcaacctgcgtgcttcccgatcccaacagcgtgtctccggcccggacc
cactctccccgggttaccaccacagggcccctggcatacctcaaggttgccgaggggtgc
agcaggcactgcacctattgcattatcccgtcgcttcgggggaagtaccgcagccggtcc
attgaggacatcactgccgaagccaagcgtcttcttgacgggggtgttcaggaactgaac
ctcgtggcggagagcaccaccgattacggagaggacctgggacagcccggcaaactcgcc
gaagtgcttgaagccctttccgagcaggctcccggcaagtggattcgttttctctacgcg
tttcctgataccctggacgatgccaccatcaagctgacggcagaaaaagagaacatctgc
gcctactacgatattccgattcagcacgcctcggacgccatcatcaaaaaaatgggccgc
cactacacccaggaggatcttcggaccctctttgcccggcttcgccgggacgttcccggg
gtggcccttcgcaccacggtgattgtgggcttccccggcgagaccgaagagcatttccag
gaccttcttgattttatcaccgaggtggagtttgaccacctgggtgtctttacctattcc
gactccgaagagcaggcctcacacaagctgcccggtcatgtggacgaagagatcgcccag
aagcgccaggatatgatcatggccgcccaggaggagatctccgccatccggaacatgggc
cgtgtgggtgaggtctatcaggtgctcatcgaagagaatcccgaagaggggtcttacatt
ggccggacctttttccaggccccggaggtggatggggtgaccttcgtctacggcgagggg
ctgaccatcggctcttttgtcgacgtccgcatcacggacgccattgtctacgatctgtca
ggagaagtggtatga
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