Delftia sp. Cs1-4: DelCs14_3865
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Entry
DelCs14_3865 CDS
T01497
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
del
Delftia sp. Cs1-4
Brite
KEGG Orthology (KO) [BR:
del00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
del03009
]
DelCs14_3865
Enzymes [BR:
del01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DelCs14_3865
Ribosome biogenesis [BR:
del03009
]
Prokaryotic type
ribosomal protein modification factors
DelCs14_3865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AEF90853
LinkDB
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Position
complement(4379218..4380612)
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AA seq
464 aa
AA seq
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MNETAVKVDRLPRIGMVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIVNTCGFI
DDAVRESLDTIGEALAENGKVIVTGCLGAKAGKDGGNLIQEVHPSVLAVTGPHATQEVMN
AVHTHLPKPHDPFIDLVPGAFGEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVS
RPVGDVLKEARALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVQTLAE
IAEPYGAWVRLHYVYPYPSVDEIIPFMATGRVLPYLDVPFQHSHPDVLKRMKRPANGERN
LERLQRWREICPDLVIRSTFIAGFPGETEQEFEHLLQFLREAQIDRAGCFAYSPVEGAAA
NEIPGMLPLEVREERRARFMAVAEEVSTARLQKRVGQTMQVLVDKSVGLGKKGGVGRSYA
DAPEIDGLVHLLPPEKASKTYKVGDFVKARIVGTQGHDLVGQPV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaactgctgtcaaagtggatcggctgccccgtataggtatggtctccctcggg
tgccccaaggcactcacggactccgaactcatccttacccagctcagcgccgagggctac
cagacctccaagaccttcgagggcgctgatctggtgatcgtcaacacctgcggcttcatc
gatgacgccgtgcgcgagagcctggacaccattggcgaggcgctggccgagaacggcaag
gtcatcgtcacgggctgcctgggcgccaaggcgggcaaggacggcggcaacctgatccag
gaagtgcaccccagcgtgctggccgtgaccgggccgcacgccacgcaggaggtgatgaac
gccgtccacacccatctgcccaagccgcacgatcccttcatcgacctggtgccgggcgcc
tttggcgaggcgggcatcaagctcacgcccaggcactacgcctacctgaagatttccgag
ggctgcaaccaccgctgcaccttctgcatcattccctccatgcgcggcgacctggtttcg
cgtcccgtgggcgatgtgctcaaggaggcgcgtgcgctgttcgagggtggcgtcaaggag
ctgctggtgatcagccaggacacctcggcctatggcgtggacgtgaagtaccgcacgggc
ttctgggacggaaaaccggtcaagacgcgcatgctcgaactggtgcagacgctggccgag
atcgccgagccctatggcgcctgggtgcgcctgcactatgtctatccgtaccccagcgtg
gacgagatcattccgttcatggccacgggccgcgtgctgccctatctggacgtgcccttc
cagcacagccatcccgatgtcttgaagcgcatgaagcgccccgccaacggcgagaggaac
ctggagcgcctgcagcgctggcgcgagatctgcccggatctggtgatccgttccaccttc
atcgcgggattccccggcgagaccgagcaggagttcgagcacctgctgcagttcctgcgc
gaggcgcagatcgaccgcgcgggctgctttgcctacagcccggtcgaaggcgctgccgcc
aacgagattcccggcatgctgcccctggaagtgcgtgaggagcgccgtgcgcgcttcatg
gccgtggccgaagaggtttccactgcgcgcctgcaaaagcgcgtgggccagaccatgcag
gtgctggtggacaagtccgtgggcctgggcaagaagggtggcgtgggccgcagctatgcc
gatgcgcccgagatcgacggcctggtgcacctgctgccgcccgagaaggccagcaagacc
tacaaggtgggcgacttcgtgaaggcgcgcatcgtgggcacgcagggccacgacctggtg
ggccagcctgtgtaa
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