Delftia sp. Cs1-4: DelCs14_5611
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Entry
DelCs14_5611 CDS
T01497
Name
(GenBank) Extradiol ring-cleavage dioxygenase LigAB LigA subunit
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
del
Delftia sp. Cs1-4
Pathway
del00362
Benzoate degradation
del00624
Polycyclic aromatic hydrocarbon degradation
del00627
Aminobenzoate degradation
del01100
Metabolic pathways
del01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
del00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DelCs14_5611
00627 Aminobenzoate degradation
DelCs14_5611
00624 Polycyclic aromatic hydrocarbon degradation
DelCs14_5611
Enzymes [BR:
del01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
DelCs14_5611
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Motif
Pfam:
LigA
BacteriocIIc_cy
Motif
Other DBs
NCBI-ProteinID:
AEF92581
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Position
6310102..6310443
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AA seq
113 aa
AA seq
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MADQPQIPGTTLFDGRQARKGYALNSMCFSFNELANRQAFLADEEAYMRSYGLNQEQADA
VRARNVLQMIAAGGNAYYLAKLAGIFHLDMQDIGAQQTGMTKAEFQALLRSHA
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccagccgcagattcccggcaccaccctgttcgacggcaggcaggcccgcaag
ggctatgcgctcaacagcatgtgcttttccttcaacgagctggccaaccgccaggccttc
ctggccgacgaggaggcctatatgcgcagctacgggctgaaccaggagcaggccgatgcc
gtgcgcgcgcgcaacgtgctgcagatgatcgcggccggcggcaacgcctactacctggcc
aagctggccggcatcttccacctggacatgcaggacataggcgcccagcagaccggcatg
accaaggccgaattccaggccctgctgcgctcgcacgcctga
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