Demequina sp. TMPB413: LGT36_009845
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Entry
LGT36_009845 CDS
T08088
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem00190
Oxidative phosphorylation
dem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LGT36_009845
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGT36_009845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dem03019
]
LGT36_009845
Enzymes [BR:
dem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LGT36_009845
Messenger RNA biogenesis [BR:
dem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LGT36_009845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
AcetylCoA_hyd_C
Motif
Other DBs
NCBI-ProteinID:
UPU89740
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All DBs
Position
2066506..2068662
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AA seq
718 aa
AA seq
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MLPHPIEPSHGAPEGLPEDRFLDRELSWLAFNERVLELAEDESTPLLERARFLAIFASNL
DEFFMVRVAGLKRRIAAGFAVPSATGLSATRLVELLTENAHELMDRHAAVFHDQLRPALA
SEGITLVRHDDLEEPERGRLRKLFRSDIFPVLTPLAVDPAHPFPYISGLSLNLAVEIRDP
DTGKDFFARVKVPETLPRFLSVDAKGKASQVTDASVLSDEPRSFVPLEEVIGAHLDYLFP
GMEVVDHYTFRVTRNEDVEVEEDDAENLLKAMERELLRRRFGPAVRLEVAEDLSPKVREL
LVRELGISDSDVYQLPAPLDLRGLDVIADLDRPRLQFPAFRPTTHHKLAPVETADEQNVF
QALSRSDVLLHHPYDSFSTSVQAFVAQAAVDPKVLAIKQTLYRTSGDSPIVDALIEAARN
GKQVLALVEIKARFDEQRNISWARKLEQAGVHVVYGLVGLKTHCKLLLVVRQEDDGLHRY
CHIGTGNYHPRTARLYEDYGLLTKDPDVGSDLTKLFNQLSGYAPKAKFRRLLVAPTSVRA
GLIDLIDAQADRAREGREAWVKFKVNSVVDEKIIDALYRASQAGVHVDLVVRGICAMRAG
VPGLSDNIRIRSVLGRFLEHSRVYAFHGEDEPVVYIGSADLMHRNLDRRIEALISISDAT
QRELLIENIDLAMGDDVAAWELGADGEWTRSTSGPDGPLRDLQSMYIERQPERRTRRK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgctcccccaccccatcgagccgagccacggcgccccggaggggctgccagaagaccgc
ttcctcgacagggaactgagctggctggccttcaacgaacgcgtgctggaactcgctgaa
gacgagtcgactccgctgctggagcgcgcacgctttctcgcgatcttcgcctccaacctt
gacgagttcttcatggtgcgggtggcggggctgaagcggcgcatcgcggcgggcttcgcg
gtgccgagcgcgacgggattgagcgcgaccaggctggtcgagctgctcacagagaacgcc
cacgaattgatggacaggcacgcggccgtgttccacgaccagttgcgccccgcccttgcc
tctgaaggcatcacgctggtgcgccacgacgacctcgaggagcccgagcggggacgactg
cgcaaactgttccgctccgacatcttcccggtgctgaccccgctcgcggtggaccctgcc
cacccgttcccttacatttccggcctgtcgctcaacttggcggtcgagatcagggacccc
gacactggcaaggacttctttgcccgcgtgaaggtccccgagaccctgccgcggttcctc
agcgtcgacgccaaaggcaaggcttctcaggtcaccgacgcctcggtgttgtcggacgag
ccccgcagctttgtcccgctagaagaggtgatcggcgctcacctcgactacctgttcccc
ggcatggaagtggtggatcactacaccttcagggtcactcgcaacgaggacgttgaggtc
gaagaagacgacgccgagaacctgctgaaggcgatggagcgcgagctcttgaggcggcgc
ttcggcccagcggtgcgcctcgaggtcgccgaggacttgagccccaaggtgcgcgagcta
ctggtgcgcgaactcggcatctcggactccgacgtctaccagctccctgcccctttggac
ctgagggggctcgacgtgatcgcggacctcgaccgccctcgccttcagttcccggccttc
aggcccaccactcaccacaaactggctcccgtggagacggcagacgagcagaacgtgttc
caggcgctcagccgctcggacgtgttgcttcaccacccgtacgactccttctccacgtca
gtgcaggcatttgtggcgcaagcagcggtcgaccccaaggtgctcgccatcaagcagacg
ctgtaccgcacgtccggggactcgccaattgtcgacgccctgatcgaggcggcgcgcaac
ggcaagcaggtgctggcgctggtggaaatcaaggccaggttcgacgaacagcgcaacatc
tcgtgggcacgcaagctcgaacaggcaggcgtgcacgtggtgtacggcctggtgggtctc
aagacccactgcaagttgctgctggtggtccgccaagaggacgacggcctgcaccgctat
tgccacatcggcaccggcaactatcacccgcgcaccgcacggctgtacgaggactacgga
ctgctcaccaaggaccccgacgtcggctccgacctcaccaagctcttcaaccagctctcc
ggctatgcgccgaaggccaagttccgccggctcctggtcgcacccacctcggtgcgcgcg
gggctgatcgatctgatcgacgctcaagccgatcgcgcccgcgagggcagggaggcgtgg
gtcaagttcaaggtcaactctgtggtcgacgagaagatcatcgacgccctctaccgcgcg
tctcaggctggcgttcacgtggacctggtggtgcgcggcatttgcgcgatgagggccggg
gttcctggcctcagtgacaacatcagaatcaggtcagtgctcgggcgattcctggagcac
tccagggtctatgcgttccacggcgaggacgaaccggtggtctacatcggctctgccgac
ctgatgcaccgcaaccttgacaggcgcatcgaggcgctcatctccatttccgacgccacg
cagcgtgagttgctgatcgagaacatcgacctggcgatgggcgacgacgtcgcggcgtgg
gagttgggcgcagacggcgagtggacccgctcgacatcgggacctgacggcccactacgc
gacttgcagtcgatgtatatcgagcgtcagccagagcgcaggactcggcgcaagtga
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