Drosophila erecta: 6551095
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Entry
6551095 CDS
T01060
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
der
Drosophila erecta
Pathway
der03020
RNA polymerase
der03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6551095
09124 Replication and repair
03420 Nucleotide excision repair
6551095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
der03021
]
6551095
03400 DNA repair and recombination proteins [BR:
der03400
]
6551095
Enzymes [BR:
der01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6551095
Transcription machinery [BR:
der03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
6551095
DNA repair and recombination proteins [BR:
der03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
6551095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3137
Motif
Other DBs
NCBI-GeneID:
6551095
NCBI-ProteinID:
XP_001977109
FlyBase:
FBgn0084527
UniProt:
B3NUC1
LinkDB
All DBs
Position
Unknown
AA seq
1889 aa
AA seq
DB search
MSTTTDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGVQFAETMEGGRPKLGGLMDPRQGV
IDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPHNP
KIKEIVMKSKGQPRKRLAYVYDLCKGKTICEGGEDMDITKGNQQPDPNKKPGHGGCGHYQ
PSIRRTGLDLTAEWKHQNEDSQEKKIVVSAERVWEILKHITDEECFILGMDPKYARPDWM
IVTVLPVPPLAVRPAVVMFGAAKNQDDLTHKLSDIIKANNELRKNEASGAAAHVIQENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHICFLELGHDIAGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQQAIKKAKDDVINVIQKAHNMELEPT
PGNTLRQTFENKVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGELVEFQNMPT
VKLSNKAFEKRFKFDWSNERYMRKVFTDDVIKEMTDSSEAIQELEAEWDRLVGDRDSLRQ
IFPNGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDLSPMRVIKGVKGLLERCVIVTGNDR
ISKQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVISEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLTMEQIAEKINVGFGEDLNCIFNDDNADKLVLRIRIMNNEENK
FQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGEF
KAIGEWLLETDGTSMMKVLSERDVDPIRTSSNDICEIFQVLGIEAVRKSVEKEMNAVLQF
YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAET
DPMRGVSENIIMGQLPKMGTGCFDLLLDAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTP
SMTPPMTPWANCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSS
PGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYA
STTPNFNPQSTGYSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANY
SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP
HYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY
SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP
MYSPTAPSHYSPTSPAYSPSSPTFEESDD
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaccacggattcgaaggcgccgctgcgccaggtgaagcgcgtacagttcggc
attttgtcacctgatgaaattcgtcgcatgtccgtcaccgagggtggcgtccagtttgcg
gagacgatggagggcggacgtccgaaactgggcggattgatggatccgcgccagggcgtc
atagacaggacgtcgcgctgtcagacgtgcgccggcaatatgactgagtgccccggacac
tttggacacatcgacctggccaaaccagtgttccacatcggctttatcaccaagacaatt
aagattctgcgttgtgtgtgcttctattgctccaaaatgctggtctcgccacacaatccg
aagatcaaggagatcgtgatgaagtccaagggtcagccgcgtaaacgtctggcttacgtc
tatgatctgtgcaagggcaagacgatttgcgagggcggcgaggacatggatatcaccaag
gggaaccagcagccggatccaaacaaaaagcccggccacggcggttgcggtcactatcag
ccgtcgatccggcgaacaggactggatctcaccgccgagtggaagcatcagaacgaggat
tcgcaggagaagaagattgtcgtatcggcggagcgtgtttgggaaattctgaagcatatc
accgacgaggagtgctttattctgggcatggaccccaaatatgcgcgtcccgattggatg
atcgtcaccgtcctgcctgttccaccattggccgtgcggccggcggtcgtgatgttcggt
gcagccaagaatcaggatgatttgacgcacaagctgtctgatatcatcaaggcaaacaat
gagctacgtaagaacgaggccagtggagcggcagcgcatgtgatccaggagaacatcaag
atgttgcagtttcacgtcgccacactggtggacaatgatatgcccggcatgcccagggct
atgcaaaagtcgggaaaacccctcaaagccatcaaggcgcgtctcaagggtaaggagggt
aggattcgtggcaatttgatgggtaaacgtgtggatttctccgctcgtactgtcatcaca
cccgatccaaatctgcgtatcgatcaggtcggtgtaccgcgttctattgcccagaatctg
accttccccgagctggtgactccattcaacatcgatcgcatgcaagagcttgtgcgccga
ggtaactcacagtacccgggtgccaagtacattgtgcgtgacaatggcgagcgtattgat
cttcgcttccacccgaaatcctctgacctacatctgcagtgcggctacaaggtggagcga
catttgcgcgacgacgaccttgtgatcttcaaccgacagcccacgctgcacaagatgagt
atgatgggtcacagggtgaaagtgctgccctggtcgacgttccgcatgaacctctcgtgt
acatcgccctacaatgccgatttcgatggcgatgagatgaatctgcacgttccgcagtcc
atggagacgcgtgccgaggtggagaacatccacatcacacccagacagatcatcacgccg
caggcgaacaaacccgtcatgggtatcgtgcaggacactctgactgcggtgcgaaagatg
accaagcgtgacgtattcatcacgcgggaacaggtgatgaatctgctcatgttcctgccc
acgtgggacggtaaaatgccacaaccttgcatcctgaaaccgcgtcctctgtggacaggc
aaacagatcttctccctgatcatccccggcaacgtgaacatgatacgcacgcattccacg
catccggacgaggaggacgatggaccgtacaagtggatctcgcccggtgacaccaaggta
atggtggagcacggtgaacttatcatgggcattctctgcaagaagactctgggtacttca
gctggatcgctgctgcatatttgcttcctggaacttggtcacgacatcgctggccggttc
tacggcaacattcagaccgtgatcaacaattggctgctgctcgagggccatagtatcggt
attggtgacaccattgccgatccgcagacctacaacgagatccagcaggccattaagaag
gccaaggacgacgtgataaacgttatccagaaggcccacaacatggagctggagcccacg
ccgggtaatactctgcgtcagaccttcgagaacaaggtgaaccgtatcctaaacgatgct
cgtgacaagactggtggttcggccaagaaatctctcactgagtacaacaatttaaaggct
atggtggtgtctggttccaagggttccaacattaatatctcacaggttattgcttgcgtg
ggtcagcagaacgtggagggtaagcgaatcccctacggtttccgcaagcgcactcttccc
cactttatcaaagacgattacggtcctgagtcccgcggttttgttgagaattcgtatctt
gctggcctgactccctctgagttctatttccacgccatgggtggtcgcgagggtcttatc
gatactgctgtaaagacagctgaaaccggttacatccagcgtcgtcttataaaggctatg
gagtcggtgatggttaactacgacggcactgtgcgtaactcggtgggccaactgattcag
ctgcgttacggcgaggacggcctgtgtggcgagttagtagagttccagaacatgcccacg
gtgaaactgtcgaacaaggcgttcgaaaagcgcttcaaatttgactggagcaacgagcgg
tacatgaggaaggtatttacggacgatgtcattaaggaaatgaccgacagcagcgaagcc
attcaggaactggaggcagagtgggatcgtttggttggcgatcgcgacagtttgagacaa
atcttccccaacggcgattccaaggtggtgctgccgtgtaacttgcagcgtatgatctgg
aatgtgcagaagatcttccacatcaacaagcgcctgcccacggatctctcgcccatgcgg
gtgatcaagggcgttaagggattactcgaacggtgtgttattgtcacgggaaacgatcgt
atttccaagcaggccaacgagaacgccacgttgctattccagtgcctaatccgctcgaca
ctgtgtacgaaatacgtgtcggaggagttccgcctgtccacggaggcatttgagtggttg
atcggagaaatcgaaactcgtttccagcaggcccaggctaatcccggcgagatggtgggt
gcgctggctgcccagagtttgggtgagcccgctactcagatgacactgaacaccttccat
tttgctggtgtgtcgtcgaagaacgtaacactgggtgtgccgcgtctcaaggagatcatc
aacatatccaagaagcccaaggctccgtcgctaaccgttttccttactggcggcgctgcc
cgcgatgcggagaaggccaagaacgtactgtgccgcctggagcataccacgctgcgcaag
gttacggcgaacacggctatttactacgacccggatccgcagagaacggtgatatccgag
gatcaagagttcgtaaatgtctattacgaaatgcctgactttgatcccactcgcatctca
ccctggttgctgcgtattgagttggaccgcaagcgaatgacggacaagaagctgaccatg
gaacagattgccgagaagatcaacgtgggcttcggagaggacctcaattgtatattcaat
gatgacaatgctgataagctggtgctgcgcattaggatcatgaacaacgaggagaacaag
ttccaggacgaagacgaggccgtcgacaagatggaggacgacatgttcctgcgttgcatt
gaggccaacatgctgtcggacatgacactgcagggcatcgaagccatcggcaaggtgtac
atgcatctgccacagaccgacagcaagaagcgtatcgtgatcacggagaccggagagttt
aaggccattggcgaatggctgcttgagacggacggcacatcgatgatgaaagtgttgtct
gagcgtgacgtggacccgatccgcacatcatccaacgatatctgcgagattttccaggtg
ctgggcatcgaggcggtgcgaaagtctgtcgaaaaggagatgaacgctgtgctgcagttc
tacggcctgtacgtaaactatcgtcacctggccctgttgtgcgatgtgatgaccgccaag
ggccatctaatggccatcacccgtcacggcatcaacaggcaagacactggtgcccttatg
cgttgctcttttgaggagacagtggacgtgctgatggatgccgccgctcacgcagaaacg
gatcccatgaggggcgtatctgagaatattatcatgggacagctgcccaaaatgggtacc
ggctgctttgaccttctgctcgatgcagagaagtgtcgtttcggcatcgagattccgaat
acattgggcagcagcatgctaggcggcgccgctatgtttattggcggtggatcaacaccg
agcatgacgccaccgatgacgccgtgggctaactgcaacacgccgcgatacttctctcca
cccggccacgtgagtgccatgactcctggcggtcccagtttctcaccttcggctgcatcg
gatgcgtccggaatgtcgcctagctggtcgccggctcatccgggttcatcgccgagttca
ccaggcccttcgatgtcgccgtacttcccagcctcgcccagtgtgtctccctcttattca
ccaacaagtccgaactatacggcatcgtcacccggtggagcctcgcccaattactcgccc
tcaagtccgaactattcgccgacatcgccgctctatgcgtctgcaagtccacgttacgcc
tcgacaacgccaaatttcaatccgcagtcgacgggttactcgccatcttcatcgggatat
tcgccaacatccccggtgtactcgcccacgccgcacttccagtctagtccgtcgtttgcg
ggcagcggtagcaacatttactcgccggcaaatgcgtactcgcccagctcggccaactac
tcacccaattcaccatcctattcgccgacttcaccatcgtactcgccgtcgagtccttcg
tactcaccaacgtcgccttgctattcgcccacatcgccttcgtactcgccaacgagtccg
aactacacccccgtaacaccctcatactcgccgacaagtccgaactactctgcgtcgccg
cactattccccagcctctccagcttactcacagacgggggtgaagtactcgccgacatcg
ccgacgtactcgccgccttcaccgtcgtacgatgggtctccaggatcaccacaatatacg
ccaggatcgccgcagtactcgcctgcctcgccgaagtactcgccgacctcaccgctgtac
tcacctagctcgccgcagcactctccctccaaccagtacagtccaacaggatcgacctac
tcggcgacgagtccacggtactcgccgaacatgtccatctactcgccgagcagcaccaag
tactcacccacctcgccaacgtacacgcccacggcccgcaactactcgcccacgtctccg
atgtactcgccaacggcgccatcacactacagtcccacgagtccggcctactcgcccagc
agtcccacgttcgaggagagcgacgactga
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integrated database retrieval system
