Desulfurococcus amylolyticus DSM 16532: Desfe_1197
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Entry
Desfe_1197 CDS
T02136
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfd03016
]
Desfe_1197
Enzymes [BR:
dfd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Desfe_1197
Transfer RNA biogenesis [BR:
dfd03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Desfe_1197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AFL67067
UniProt:
I3XSZ3
LinkDB
All DBs
Position
complement(1140948..1142246)
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AA seq
432 aa
AA seq
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MRVYIETYGCALNKSDEALMVESILREGHVLVNSIEDADTFIINTCIVRLDTEYHMVKRI
RELYEVASRTGKKLIVAGCMAKAEPYTVLKIAPEASLVSPQNSALITEVLKTRGKIVLID
GLRERDRIGIHVEDRIAPIPIQEGCLSDCSFCITKHARRILVSHSIDAVVKAVERAVRNG
AVEIQLTGMDLGTYGLDLYKTRKLPELVKEVSRRVSGEYMVRIGMINPEHLRHILDDLID
AINESSKVYRFLHIPLQSGSNKVLSVMRRNYSVEEYIEIVNEVKSRIPGVSIATDIIVGH
PMEDEEDFSETLKVIRELEFERVHLAGYSIRPLTYSASLPQVPTRVKKERVLRALQVIEE
VGLKIRLKYIGKEVECFTTEHSNTWICRLENYIPVVVTGKGRDPALDYGRWIRVLVDNAT
FFDLRGRLLESK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgtatattgagacctatggatgtgccctgaataaaagcgatgaagcattgatg
gtagagagtattctgcgcgagggacacgtattagttaacagtatcgaagatgctgatacc
tttataatcaatacatgtattgtgagactagatacagaataccacatggttaaaaggata
agggagctgtacgaagtagctagtagaacaggtaagaagctgattgtagccggatgtatg
gccaaggccgaaccatacacggtgttaaagatagcgcctgaggccagccttgtttcaccc
cagaattctgccttgatcacagaagtcttgaagacgcggggtaagattgtattgattgat
ggattaagggaaagggataggataggaatccatgtagaagataggatcgccccgatacca
atacaggagggctgtctaagcgattgtagcttttgtataaccaagcatgctagacgcatc
cttgtcagtcatagtatcgatgccgttgtaaaagcagtggagagagcagttagaaacggg
gcagtagagatacagttaacgggtatggatctaggtacatatggcttggacctctataag
acacggaagcttccggagctagttaaggaggtgagtagaagagtcagcggtgaatacatg
gttagaataggtatgataaacccggagcacttacgccacatccttgatgatttaatagat
gctatcaatgaatccagcaaggtatataggttcctccacatacctctgcaatcagggagc
aataaagtacttagtgtaatgcgccgcaactatagcgtggaggagtatatcgagatagtt
aatgaggttaaatcaaggatacctggtgtaagcattgcaaccgacatcattgttggacat
ccaatggaggatgaggaagacttcagcgagacccttaaagttataagggaactagagttt
gaaagggttcacttggcaggttatagtataagaccgctgacttattcagcgtcactaccc
caggtaccaaccagggttaagaaggaaagggttctaagggccctacaggtcatagaagag
gttggcttgaaaatacgtttaaaatacattggaaaagaagtagaatgtttcaccacggag
cattcgaatacatggatttgcaggcttgaaaactatatcccggtagtggtaacaggtaag
ggcagagaccccgctctagattatggtagatggatcagggtactcgtagacaatgctaca
tttttcgatctaagggggagactcctggagagtaagtag
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