Dyadobacter fermentans: Dfer_3605
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Entry
Dfer_3605 CDS
T00970
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dfe
Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfe03009
]
Dfer_3605
Enzymes [BR:
dfe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Dfer_3605
Ribosome biogenesis [BR:
dfe03009
]
Prokaryotic type
ribosomal protein modification factors
Dfer_3605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ACT94812
UniProt:
C6VU44
LinkDB
All DBs
Position
complement(4403780..4405090)
Genome browser
AA seq
436 aa
AA seq
DB search
MKTKGIVKNKVNIVTLGCSKNLVDSEVLYTQLKGNGFAVDHESKKDDSQIVVINTCGFID
NAKEESINTILRYADAKAAGMVDKVYVTGCLSHRYKDELSVEIPTVDAWFGTNELPRLLK
TLKADYKHELVGERLLTTPAHYAYLKIAEGCDRPCSFCAIPLMRGGHVSRSIEDLVKEAK
SLAKRGTKELILIAQDLTYYGLDIYKKRNLSDLLRNLSDVEGIEWIRLQYAYPAGFPMDV
LDVMNERSNIAKYLDMPLQSGSTEMLKLMRRGITREKTEALIHSIRDKVPDIALRTTLIV
GHPGETEELFDETYEFVEKMRFDRLGAFQYSHEDNTHSFSMEDDVEAEVKQERADAIMEL
QQGISAELNQAKIGKTFKVLFDRKEGGYFIGRTEFDSPEVDNEVLVLASQYVRLGDYAQV
KVTSAEEFDLYGEVIS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaggaatagttaagaataaggtcaatatcgtgacgctgggttgttccaaa
aacctggtcgactcggaggtgctgtacacgcagctcaaaggcaacgggtttgcggttgac
cacgaatccaaaaaggatgattcgcagattgtcgtgatcaatacctgcgggtttatcgac
aatgcgaaggaagaatctatcaacaccattttgcgctacgccgatgccaaagcggcaggg
atggtagataaagtgtatgtgacaggctgcctgtcgcaccggtacaaggatgaactttcg
gttgaaatacctaccgtagacgcctggttcgggaccaacgagctgccccgcctgctcaaa
accctcaaagcagactacaaacacgagctcgtgggcgagcgcctgctcaccacgcctgcg
cattatgcctacctgaaaatcgccgaaggctgcgaccgcccgtgctcgttctgcgccatc
ccgctcatgcgcggaggccacgtgtcacggtcgatcgaagatctggtgaaagaagcgaaa
tcgcttgccaaacgcggaactaaagagcttattctcattgcccaggacctgacttactac
ggcctggatatttacaaaaaacgcaatctttccgacctgctccgtaacctttccgacgtg
gagggcatcgagtggattcgcctgcaatatgcctatccggccgggttcccgatggatgtg
ctggatgtgatgaacgagcgcagtaacattgccaaatacctcgatatgccgctccaatcg
ggctcgacggaaatgctgaaactcatgcgccgcggcattacccgcgaaaaaacggaagcg
ctcatccattcgatccgtgacaaagtgcctgatatcgcgttgcgtacgacactgatcgtc
ggacaccctggcgaaacggaagaattgtttgacgagacctacgaattcgttgaaaaaatg
cgtttcgaccgcctgggggcattccagtactcgcatgaggacaatacgcattcattctcg
atggaggacgatgtggaagcggaagtgaaacaggagcgcgccgatgccattatggaattg
cagcaaggcatttcggcggagctgaaccaggcaaaaatcgggaagacattcaaagtcctg
ttcgaccgtaaggaaggcggctatttcatcggccgcacggaattcgattcacccgaggtg
gataacgaagtactcgttctggcgagccaatatgtgcgcctgggcgattatgcgcaggta
aaagtgacgtcggcggaggaatttgacctttatggtgaagtgatttcctga
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