Dyadobacter fermentans: Dfer_4139
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Entry
Dfer_4139 CDS
T00970
Name
(GenBank) Beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe00052
Galactose metabolism
dfe00511
Other glycan degradation
dfe00600
Sphingolipid metabolism
dfe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Dfer_4139
09103 Lipid metabolism
00600 Sphingolipid metabolism
Dfer_4139
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Dfer_4139
Enzymes [BR:
dfe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Dfer_4139
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
BetaGal_gal-bd
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
ACT95342
UniProt:
C6W015
LinkDB
All DBs
Position
complement(4998475..5001864)
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AA seq
1129 aa
AA seq
DB search
MQFSTPRAFLTLFFLIQIVHHAAHAQAIPEWQDPQVISINTEKPRADFFPYTTEKAALAM
DKKGSFVQSLNGSWKFKWAPHPSKAQLNFYDPKVSDASWDNIPVPSNWQVVGAREGRKYD
RPIFSNIKHPFKATPPRINADTNAVGMYRTTFTVADVKDKQIFLHFGGVQSACYVWLNGV
AIGYHEDGMTPFEFDVTEDVKAGVNNLAVEVINWSDGSYLEDQDYWRLSGIFRDVNLLLL
PKVVLTDYSVRTILDANHDNATLKLSAFVKNYGQQPIHAHQVLFTLYDAAKNVVTTPVSQ
MVGTLEMGREGAVRAEMPVPSPAKWSAETPNLYMLTVQLMNSDGKVIEATSQRVGFRDVK
IKGGQLLVNGKAITIKGVNRHEFDPETGRVISRESMMRDITLMKQHNINAVRTSHYPNAS
EWYDLCDQYGLYVMDEANIESHELWSKGIILADNPQWRSAFLARGNAMVERDKNHPSVII
WSLGNESGMGQNFVDMGDFIKLADPTRPIHYEGRKDYKPTTLSSFDIISVMYPSTQDMTE
LVKKDKTRPLIVCEYAHGMGNSVGNLKEYWDVIEKYPTMQGGFIWDWVDQGLKLKRPDGT
DYWDYFNYLDGANAGDGLVNPDRTPQPELNEVKKVYQYVKFEMPDTLKTGEKALTLHNTY
DFQSLNAFELVWSVIENGKPAGKGGSIANLNALPRHKQQLTIPYELPAASKPNAEYFLNL
SLRLKDATLWAPKGHEVAWHQVPVVKPATPRPNLSLYGERPLRIAQISSARVQVAGQDFT
VVFDKNEGRMISFKNKKEEMLESGPYANFWRVPTDNDEGGAAKSYATQWRNFGLDTLERV
SSEMKTQRLTAQIYKVTLSQTLKQPKGEMDVQSVYMVYASGDIHVQNTFTPRGEWPPLAK
IGMQLRMPATFTKTQWFGNGPHETYADRKTSAKVGIYAGTVAEQHFPYITPQENGNKTGI
RWATVTNAEGTGLLVLSDTAFNFNVHDYTDKDLLAAKRRAAVLARGTSTTVNIDLAQMGL
GGDDSWSPRVHEAYLLPAKTYSYAFRLRPIESTSNIEQIAAVRLPYVDQKETNESVSTAE
TAAATEEAVTEDEEEEEAVTAPVRKTTVKKAPVRKKVVRKKKPTRRRRR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctaccccccgcgcatttctgacgctgttttttttaatacaaatcgtgcac
cacgcggctcatgcacaggccattcccgaatggcaggacccgcaggtgatcagcatcaat
accgaaaagccccgcgccgattttttcccgtacaccacggaaaaagccgcattggcaatg
gacaaaaaaggctcgttcgtgcagtcgctgaacggcagctggaagttcaaatgggcaccg
catccgtcgaaagcgcagctgaatttctacgatcccaaagtctccgacgcaagctgggat
aacatccccgttccgtccaactggcaggtcgtcggcgcgcgcgaaggccgcaaatacgac
cgcccgattttcagcaacatcaaacacccgtttaaggccacgccgccgcgcattaatgcg
gataccaatgcggtaggcatgtatcgaaccacgttcacggtcgcagatgtgaaggataag
caaatattcctgcatttcggtggcgtgcagtctgcctgctatgtgtggctgaatggtgta
gcgatcggttatcacgaggacggcatgacgccattcgagttcgacgtgacagaagatgta
aaggccggcgtgaacaacctggctgtggaagttatcaattggtcagacggcagctacctc
gaagaccaggattactggcggctgtccggcattttccgggatgtgaacctgctgcttttg
ccaaaggtagttttgacagattattcggtaaggacgatcctggacgccaaccacgacaat
gcgactttgaaactcagcgcatttgtaaaaaactacggccagcagcccattcatgcgcac
caggtgctgtttacattgtatgatgctgccaaaaacgtggtgactacgcctgtgagccag
atggtaggcacgcttgaaatgggccgcgaaggtgccgtccgtgccgaaatgccggtgccg
agccccgccaaatggagtgccgaaacgccgaatttgtacatgctcaccgtccagctcatg
aactccgacggcaaggtgatcgaggcgaccagccagcgcgtgggcttccgggatgtaaaa
atcaaaggcggacaactccttgtgaatggcaaagcgataaccatcaaaggcgtgaaccgc
cacgagttcgatcccgaaaccggccgtgtgatcagccgcgagtcgatgatgcgggacatt
actttaatgaagcagcacaatatcaatgccgtaaggacctcgcattatcccaatgcttcc
gaatggtatgacctgtgcgaccaatatggcctttatgtgatggatgaggccaatatcgag
agccacgagctgtggagcaaaggcattatcctcgccgacaacccgcaatggcgctcggca
tttctcgcacgcggcaatgcgatggtggaacgcgacaaaaaccacccgtcggtgatcatc
tggtcgctgggtaacgagtcgggaatggggcagaatttcgtggatatgggcgatttcatc
aagctcgccgaccctacccggccgatccattacgagggccggaaagattacaaaccaacc
acgctgagcagtttcgacattatttccgtcatgtatccatccacgcaggatatgaccgag
ctggttaaaaaggacaaaacccgcccgctgatcgtatgcgaatatgcgcacggcatgggc
aatagcgtcggtaacctcaaagaatattgggacgtaatcgaaaaatatcccaccatgcaa
ggcggcttcatctgggactgggtggaccagggactcaaactgaaacgccccgacggcacc
gattactgggattacttcaattacctcgacggcgccaatgccggcgacggcctcgtgaac
cccgaccgcacgccccagcccgagctgaacgaagtgaaaaaggtgtatcaatatgtcaaa
tttgaaatgcccgacacgctgaaaactggcgaaaaagcccttacgctgcacaatacctac
gactttcagtcgctgaatgcatttgaactggtttggtcagtgatcgaaaacggcaagccg
gcaggcaaaggcggcagcattgcaaacctgaatgcattgccgcgccacaaacagcagctt
accatcccctacgagctgcctgccgcttccaaaccgaatgcggaatattttctgaatctg
agtttgagactaaaagatgccacgctgtgggcgccgaaaggccatgaagtggcctggcat
caggtgccggtggtgaaaccggccacaccgcggccaaacctgagcctgtacggcgaacgc
ccgctccgcattgcgcaaatcagctcggcccgcgtgcaggttgccggccaggatttcacg
gtggtgttcgacaaaaacgaaggccgcatgatttcttttaaaaacaaaaaagaagaaatg
ctcgaaagcgggccatatgccaacttctggcgcgtcccgaccgataacgacgaaggcggc
gcagccaaaagctacgccacgcaatggcgcaatttcggtctggatacattggagcgcgtt
tcctccgaaatgaaaacccagcggctcacggcacagatttacaaggtgacgctcagccag
acattaaagcagccaaaaggtgaaatggatgtgcaatcggtatatatggtttatgcttcg
ggcgacattcatgtacaaaacactttcacgccccgcggcgaatggcccccgctcgccaaa
attggcatgcagctccgaatgccggccacatttaccaaaacccaatggttcggcaacggc
ccccacgaaacctatgcagatcgtaaaacgagcgcaaaagtgggcatttacgccggaacg
gtggccgagcagcatttcccttacattacgccgcaggaaaacggcaataaaaccggcatt
cgctgggcaaccgtcaccaatgcggaaggcaccggcctgctcgtgctgagcgataccgcg
ttcaatttcaacgtgcacgattatacagacaaagacctcctggcagcaaaacgccgcgca
gcggttttggcccggggaacgtccacgaccgttaacatcgacctcgcgcaaatgggcctg
ggcggcgacgatagctggtcgccgcgcgtgcatgaagcgtacctgctgcccgcgaaaacc
tattcatacgcattcaggctgaggccgatcgaaagcacttccaatatcgagcagatagcg
gccgtgcgcctgccttatgtggatcagaaagaaaccaatgagagcgtctcgaccgcggaa
accgctgcggcgaccgaagaagcagtaacagaagacgaagaggaagaagaggcggtaaca
gcaccggtacgcaaaacgacggtcaaaaaagcgcctgttcgcaaaaaggtcgtgcggaag
aagaaaccgacccggcgccgcaggagataa
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