Desulfovibrio fairfieldensis: AXF13_02335
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Entry
AXF13_02335 CDS
T04293
Name
(GenBank) diaminopimelate aminotransferase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi00300
Lysine biosynthesis
dfi01100
Metabolic pathways
dfi01120
Microbial metabolism in diverse environments
dfi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXF13_02335
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dfi01002
]
AXF13_02335
Enzymes [BR:
dfi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AXF13_02335
Peptidases and inhibitors [BR:
dfi01002
]
Metallo peptidases
Family M20
AXF13_02335
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AMD89042
UniProt:
A0A0X8JI33
LinkDB
All DBs
Position
complement(541631..542875)
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AA seq
414 aa
AA seq
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MNQNLDRLLAGLAERGERVVELQSALTACKALGPDNGGRGELDKVRRITDWLTACGVRDL
RRMDAPDNRVPDGLRPNLIARLSGTTSRTLWLFGHTDVVPPGDPAAWTSDPWRVRREGDW
LYGRGVEDNQQAIVSMLLLAEELRRQNLTPALGLGLVFMADEESGSDYGLAHVLEQAPEL
FRPDDLYIVPDAGSPRGDLIEVAEKSQLWLKVRTTGAQCHASTPHKGRNAFLAGADMVLA
CHQGLYETFPQEDPLFKPSRSTFVPSKHDANVPSVNILPGSDVFYVDCRLLPEVSQEAVL
AKAREIAARVAQRHGVEISVDVEQAQAASAAPADSPVVLALEQAVERVYGVQPRPVGIGG
ATVAALLRRKGLPAAVWACIQNTCHQPDERASISAACKDAQVFAHILMRRDAHA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaatttggacagactgctggccggtctggcggaacggggcgagcgcgttgtg
gagctgcagagcgcgctcacggcctgcaaggctctggggccggacaacggcggccggggc
gagctggacaaggtgcgccggatcacggactggctcacggcctgcggcgtgcgcgatctg
cgccgaatggacgcgccggacaatcgcgtgccggacggcctgcgccccaatttgatagcc
cgcctgtccggcacgacaagtcgcacgctctggcttttcggccataccgatgtagtgccg
ccgggcgatcccgccgcctggacctccgacccctggcgggtccggcgcgaaggcgactgg
ctctacgggcgcggcgtggaggacaatcagcaggccattgtcagcatgctgctgctggcc
gaagagttgcggcggcagaacctgacgcccgccctgggcctgggtttggtcttcatggcc
gacgaggaatccggcagcgattacggtctggcccacgtgctggagcaggccccggaactg
ttccggcccgacgatctctatatcgtgcccgacgcggggtcgccgcgcggcgatctcatt
gaagtggcggaaaaaagtcagctctggctcaaggtgcggaccaccggcgcgcagtgccac
gcctccaccccgcacaaaggccgcaacgcctttctggccggggcggacatggttctggcc
tgtcatcagggcctgtacgagacattcccccaggaagatccgctgttcaagccgtcccgc
tcgacctttgtgcccagtaagcacgacgccaacgtgcccagcgtgaacatcctgcccggc
agcgacgtcttttacgtggattgtcgccttttgcccgaggtttcccaggaagccgtgctg
gccaaggcgcgcgaaatcgcggcccgcgtggcccaacggcacggggtggagatcagcgtg
gatgtggagcaggcccaggcagcctcggccgctccggcggacagtccggtggtcctggcc
ctggaacaggccgtggagcgggtttacggcgtccagccccggcccgtgggcatcggcggg
gccactgtggccgcgctgctgcgccgcaagggcctgcccgccgccgtctgggcctgcatc
cagaacacctgccaccagccggatgagcgcgcctccatcagcgcggcctgcaaggacgcc
caggtattcgcccatattctcatgcggcgggatgcccatgcctga
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