Desulfovibrio fairfieldensis: AXF13_06505
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Entry
AXF13_06505 CDS
T04293
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi00020
Citrate cycle (TCA cycle)
dfi00620
Pyruvate metabolism
dfi01100
Metabolic pathways
dfi01120
Microbial metabolism in diverse environments
dfi01200
Carbon metabolism
dfi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AXF13_06505
00620 Pyruvate metabolism
AXF13_06505
Enzymes [BR:
dfi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
AXF13_06505
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_C
Biotin_carb_N
HMGL-like
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl
ATP-grasp_3
ATPgrasp_Ter
GARS_A
zinc_ribbon_2
ATP-grasp_4
DZR
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AMD89787
UniProt:
A0A0X8JJL2
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Position
complement(1531803..1535504)
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AA seq
1233 aa
AA seq
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MANKTFAEVQDFLKGKVILVANRGIPARRICRSIRERFDAVAAMTATDVDKTAPAASTAQ
ELVLLGSEPRAYLDIDRIIDMAKQRGVVGIHPGWGFASEDTRFPQRCKEAGITFIGATAE
AMNLLGNKVQAREVARKLGIPVVPGSDGAVDISTARRLISEIGLPIMLKAEGGGGGRGIF
AIHNEAELEDAFFKASSMAQASFGNPRLFVEKFLSGVRHIEIQVIADMYGNVFAFDERDC
TVQRNHQKLIEITPSPWPGVTRELRERLKDYSRRLVRAVGYHSLATVEFLVTAEGTPYLI
EVNTRLQVEHGITECRYGIDLVEEQIAVAFGAELRYREENLRPSYCAMQVRINCENPQDN
FAPNSGLISRYVSPGGLGVRLDSNISAGYEFPANYDSAGALLIAYAHDWEKTLGIMDRAL
GEYVIGGIKTTIPFFRKVIKNPLFRKGDINTNFIADHPELMLYTDLAPEGERLARLVAEI
SAKGFNPYVQLGEYRSATTPCLGPFEPVLPTISTAARRQPSPYPQGDRLATLDFIRDSGY
VHFTDTTPRDFTQSNSGNRFRLAEDRLIGPYLDNVGYFSIENGGGAHFHVAMMANMTYPF
TEAREWNSFAPKTLKQLLVRSTNVLGYTPQPRNLMRKTGEMICDYYQVVRCFDFLNHVEN
MRPIAEVVMSRKDVIFQPALSMSWAKGFDVAHYLNVTEAILRMVGDVMGVDPKEASRHII
LGLKDMGGVCPPRFMTALVGALRKAWPELVLHYHRHYTDGLFVPACGAAAKAGAHILDVG
LGAAVRSYGQGDVLSTMAYLEDELGLQCHLNKNALRDANFVCKQIMPYYDRYCAPYFQGI
DYDVTLHGMPGGATSSSQEGAMKQGYIHLLPYMLKFLEGTRQIVRYHDVTPGSQITWNTA
FLAVTGAWKRGGEEEVRFLLEVLGEVTRTPEAELSPEMHKARLSIYQDCNDAFRNLLLGK
FGKLPLGFPADWVYESAFGSDWKSAIARRTENSPLETLPDANLAAEEKACTEILKRRPNE
EEFVLYLNHPADALKTVQFKAKFGDPNNLPLHVWFEGLKVGQDLYFNDTSGKPHHLALLS
ISRPNEAGISICRYVLDSEFMSCEVQVSQPSAQKGKGTLMADPSNRYHVAAPSNGDLWVM
YVHPGEVVKAGEELFNVSIMKQEKAVLAPVDGIVKRVLKTADFKESKQMVSVREGELIVE
LGPVPRMCSNEACGQPIPMENAAFCPYCGSRVG
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagacattcgcggaagtgcaggattttctgaagggcaaggtcattctggtg
gcgaaccggggcattccggcccggcgcatttgccgttccatccgggagcgctttgacgcg
gtggcggccatgaccgccacagacgtggacaagaccgctcctgccgcctccacggcccag
gagttggtgctgctgggcagcgagccgcgcgcgtatctggacatcgacagaatcatcgac
atggccaagcagcgcggcgtggtgggcatccatcccggctggggcttcgcctccgaggac
acgcgctttcctcaacgctgcaaggaagccggtattacctttatcggcgccacggccgag
gccatgaacctcttgggcaacaaggtccaggcgcgcgaggtggcccgtaaactgggcatt
cccgtggtgcccggttccgacggagcggtggatatttccacggcccgccgtctgatcagc
gagattggcctgcccatcatgctcaaggccgagggcggcggcggcggccggggcattttc
gccattcataacgaagccgagctggaagacgcctttttcaaggcctcttccatggcccag
gcctcgttcggcaacccgcgtctttttgtggaaaaatttctgagcggcgtgcgccacatt
gaaatccaggtcatcgccgacatgtacggcaatgtcttcgcctttgatgaacgcgactgc
accgtgcagcgcaaccatcagaagctgatcgaaatcacgccttcgccctggccgggtgta
acccgcgagctgcgtgagcgcctcaaggattattcccgccgcctggtgcgcgccgtggga
taccattctctggccacggtggaatttctggttacggccgagggtacgccgtatctgatt
gaagtgaatacccgtctgcaggtggaacacggcatcaccgagtgccgctacggcatcgac
ttggtggaagagcagatcgccgtggctttcggcgccgagctgcgctaccgcgaggaaaac
ctgcggccttcctactgcgccatgcaggtgcgtatcaattgcgaaaatccgcaggacaac
ttcgcgcccaactccggcctgatctcgcgttatgtttcgcccggcggcctgggtgtgcgc
ctggactccaatatcagtgctggctatgagttcccggccaactatgattccgcgggcgcg
ctcctgatcgcctacgcccatgactgggaaaagaccctgggcatcatggaccgcgctctg
ggcgaatacgtcatcggcggcatcaagaccacgattcctttcttccgcaaggtcatcaag
aatcctttgttccgcaagggcgacatcaataccaatttcatcgccgaccatcccgagctg
atgctctatacggatctggccccggaaggggagcgcctggcccggctggtggctgaaatt
tcggccaagggcttcaatccctatgtgcagctcggggaataccgttctgccaccacgccc
tgtctcggccccttcgagccggtgctgccgaccatcagcacggccgcccggcgacagccc
tcgccctacccgcagggcgacagactggcgaccctggatttcattcgtgattccggctac
gtgcactttacggacaccacgccgcgcgacttcacccagtccaattccggcaaccgcttc
cgcttggccgaggacaggctcatcggtccttacctggacaatgtgggctatttctccatt
gagaatggcggcggcgctcacttccatgtggccatgatggccaatatgacctatcccttc
accgaagcccgcgagtggaacagcttcgcccccaagacgctcaagcagctgctggtgcgc
tccaccaacgtgctgggctatacgccccagccgcgcaacctgatgcgcaagaccggggaa
atgatctgcgattactaccaggtggtgcgctgtttcgacttcctcaaccatgttgaaaac
atgcggcccatcgctgaagtggtgatgtcccgcaaggacgtcatcttccagcccgctttg
tccatgtcctgggccaagggttttgacgtggcccattacctcaacgtcaccgaagcaatt
ctgcgcatggtgggcgacgtcatgggcgtggaccccaaggaggcttcacgccatatcatc
ctggggctcaaggatatgggcggcgtctgcccgccgcgcttcatgaccgctttggtcggc
gccctgcgcaaggcctggccggaactggttctgcattaccatcgccattacacggacggt
cttttcgtaccggcctgcggcgcggcggccaaggccggagcccacatccttgatgtgggc
ctgggcgcggcggtgcgttcctacgggcagggcgacgtgctctccaccatggcatatctt
gaggacgaactgggcctccagtgccacttgaacaaaaatgccctccgcgacgccaacttc
gtctgcaagcagatcatgccctactatgaccgttactgcgcgccctatttccagggcatc
gactatgacgtcaccctgcacggcatgcccggcggggccacatcctcctcgcaggaaggg
gccatgaagcagggctacatccatctgctgccctatatgctcaaattcctggaaggcacc
cgccagatcgtgcgctaccatgatgtgacgcccggttcgcagatcacctggaatacggct
tttctggccgtcaccggggcctggaagcgcggcggcgaggaagaagtgcgctttcttctc
gaagtgctgggcgaagtgacccgcacccccgaggcggaactctcgccggaaatgcacaag
gcccggctttctatctaccaggactgcaacgacgccttccgcaatctgctgctgggcaaa
ttcggtaaactgcctctggggttcccggcggactgggtatatgaaagcgcctttggttcc
gattggaagtccgccattgccaggcgcaccgaaaactcgcctctggaaacgctgccggac
gccaatctggccgcggaggaaaaggcctgcaccgaaattctcaagcggcggcccaatgaa
gaagagtttgtgctctacctcaaccatccggccgacgctctgaaaacagtccagttcaag
gccaagttcggcgatcccaacaatctgccgctgcatgtctggttcgaagggctgaaagtg
ggacaggatctctatttcaacgataccagcggcaagccgcaccatctggctctgctgagc
atttcccgtcccaacgaagcgggcatttccatctgccgctacgtgctggattcggaattc
atgagctgcgaagtgcaggtcagccagccctccgcccagaagggcaagggcacgctgatg
gccgatccctccaaccgataccatgtggccgcgcccagcaacggcgacctgtgggtcatg
tacgtccatcccggcgaggtggtaaaggccggcgaagaactcttcaatgtctcgatcatg
aagcaggaaaaggctgtgctggccccggtggacggcatcgtcaaacgcgtgctcaagacc
gccgacttcaaggaaagcaagcagatggtttctgtgcgcgaaggggaactgatcgtggaa
ctcgggccggtgccgcgcatgtgcagcaatgaagcctgcggacagcccattcccatggaa
aacgcggcattctgtccctactgcggttctcgcgtgggttag
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