Desulfovibrio ferrophilus: DFE_3188
Help
Entry
DFE_3188 CDS
T05829
Name
(GenBank) MiaB-like tRNA modifying protein YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dfl
Desulfovibrio ferrophilus
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfl03009
]
DFE_3188
Enzymes [BR:
dfl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DFE_3188
Ribosome biogenesis [BR:
dfl03009
]
Prokaryotic type
ribosomal protein modification factors
DFE_3188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBD09914
UniProt:
A0A2Z6B304
LinkDB
All DBs
Position
complement(3458368..3459669)
Genome browser
AA seq
433 aa
AA seq
DB search
MEITHVYSISLGCPKNRVDTERMLSCFGPGLTPCETPEEAEVVLINTCGFIGPAVEESVQ
AVLDAAQAIEGLEPRPVLAVTGCLVSRYQEDLAKELPEVDVWLTTREVESWPARVSEALG
RPVHNPAPGERVLSTGPSYAYLKVAEGCDHACAFCTIPSIRGPLSSRPMDQVVDEAQRML
NTGVSELVLVAQDLTAYGRDLGEKDALPRLLERLSTLEGLKWLRPMYLYPAGLTPALLDF
IKDMGRPLLPYFDVPLQHTHQDILSAMGRPFARDPRIVIDRIRDRFPEAILRTSLIVGYP
GETDEHFTALKDFVRQARFTHLGVFGYCDEEGTESFKLPGKVEQQVINERREELMRIQSI
ISEEMLMEFEGSTQEVLVDAPHEEWPGLHVGRCWFQAPEADGVTYISGPGVEPGAMVNAL
IDEAKTYDLVALT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcactcacgtctactccatcagtttgggctgcccaaaaaacagggttgatacc
gaacgcatgctctcctgctttggcccaggattgactccctgtgaaaccccggaagaagcc
gaagtggtgctgatcaacacctgcggcttcattggaccggcagtggaagaatccgtgcag
gccgttctggacgccgcccaagccatcgaaggcctggagccccgaccggtcctggctgtc
accggctgtctggtcagtcgctaccaggaagacctggccaaggaactgcccgaggttgat
gtctggttgaccacacgtgaggtggaatcctggcctgctcgagtatccgaggccctggga
cgcccagtgcacaatccggccccgggtgaacgcgttctctccaccggcccatcatacgct
tatctcaaggtggccgaaggctgcgaccacgcctgtgccttctgcaccatcccctccatc
cggggaccattgtccagccgccccatggaccaggtcgtggacgaagcccaacgcatgctg
aacaccggagtttcagaattggtgctggtggctcaggacctgaccgcctatggccgggac
ctgggtgaaaaggatgccttgccacggctgctggagcgcctgtccaccctggagggcctc
aaatggctccgacccatgtatctctatcccgcaggcctgactcctgcactccttgacttt
atcaaggatatgggccgcccgctgctgccctatttcgatgtaccattgcaacacacccac
caggacatcctctcggccatgggccgaccctttgcccgtgacccgcgtattgtcattgat
cgcatccgcgaccgctttccggaagcaatcctgcgcaccagtctcatcgtgggctacccc
ggcgagaccgacgagcatttcactgccctcaaggatttcgtacggcaggcacggttcaca
catctcggagttttcgggtattgcgacgaggagggcacggagtcgttcaagctccccgga
aaggtcgaacaacaggtcatcaacgagcgccgcgaagaactgatgcgcatccagtccatc
atcagcgaggaaatgctcatggaattcgagggcagcacccaagaggtcctggtggatgcc
ccgcatgaggaatggccaggactgcacgtgggccgttgctggttccaggcaccggaagcc
gacggcgtcacctacatctcgggccccggcgtggagccaggggccatggtcaatgccttg
atcgacgaagccaagacatatgatctggtggccctgacctga
DBGET
integrated database retrieval system
