Dickeya fangzhongdai DSM 101947: CVE23_05910
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Entry
CVE23_05910 CDS
T05277
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00730
Thiamine metabolism
dfn01100
Metabolic pathways
dfn01240
Biosynthesis of cofactors
dfn04122
Sulfur relay system
Module
dfn_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CVE23_05910
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CVE23_05910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfn03016
]
CVE23_05910
Enzymes [BR:
dfn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CVE23_05910
Transfer RNA biogenesis [BR:
dfn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CVE23_05910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ATZ93552
UniProt:
A0A2K8QJG2
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All DBs
Position
1276392..1277840
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKQYDETLAVVRHWDHIDVRAKDENQR
IAIRDALTRIPGIHHILEVEECAYTDVHHIFEQTLTTYREQLEGKTFCVRVKRRGKHDFS
SQDVERYVGGGLNQHIESARVNLTAPQVTVHLEIEQDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASRVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIRMARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EHEESLFDFSILERVVEEARNIDIRDIAEQTRQDVTEVETVGAFAASDILLDIRSPDEQD
EHPLALEQVEVKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcgattg
cgctttataaaaattcttaccggtaacatccgtaacgttttaaaacagtatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgacgttcgcgccaaagacgaaaatcaacgt
atagcgatacgtgatgcgttgacgcgtatcccgggcattcaccacattcttgaagtggaa
gagtgcgcttacaccgatgtccaccatatttttgaacaaacgctgaccacctaccgcgag
caactggagggtaaaaccttctgcgtgcgggtgaagcgccgcggcaagcacgatttcagc
tctcaggatgtggagcgctacgtcggcggcggactgaatcagcatatcgagagcgcgcgc
gttaatctgaccgctccgcaggtcacggtgcatctggaaatcgagcaggatcgcctgctg
ctgattaaagggcgctacgaagggatcggcggtttccccatcggcacgcaggaagacgtg
ctgtcgttgatctccggcggatttgactccggtgtttccagctacatgctgatgcgccgt
ggttgccgggtgcattactgcttcttcaatctgggcggcgccgcgcatgaaatcggcgtg
cgtcaggtcgcgcattacctgtggaaccgtttcggcagttcacaccgggtgcgttttgtc
gccatcgatttcgaaccggtggtcggtgaaatcctggagaaggtggacgacggccagatg
ggcgtagtgctcaagcgcatgatggtgcgggcggcgtcgcgcgttgccgaacgctatggc
gtgcaggcgctggtgaccggcgaagcgctgggccaggtatccagccagacactgaccaac
ctgcggctgattgataacgcctcggatacgctgatcctgcgtccactgatttctcacgat
aaagaacacatcatccgtatggcgcgcgagcttggcaccgaagatttcgccaaaaccatg
cccgaatactgcggcgtgatttccaaaagcccgacggtgaaggcggtgaaggccaaaatc
gagcatgaagaaagtctgtttgatttctcgattcttgaacgggtggtggaggaagcgcgt
aacatcgatatccgcgatattgccgaacagacccggcaggatgtgaccgaagtggaaacg
gtcggcgcctttgccgcgagcgatattctgctggatattcgttcgccggacgagcaggat
gagcacccgctggcgctggaacaggtggaggtaaaatcgctgccgttctacaaactgggg
acgcagttcggcgaccttgatcagagcaaaacctacctgctgtattgcgagcgcggagtg
atgagccgtttgcaggcgctgtacctgcgcgaacaagggttcaacaacgtcaaagtctat
cgcccctga
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