Dehalogenimonas formicexedens: Dform_01031
Help
Entry
Dform_01031 CDS
T04654
Symbol
trpB
Name
(GenBank) tryptophan synthase beta chain
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo00260
Glycine, serine and threonine metabolism
dfo00400
Phenylalanine, tyrosine and tryptophan biosynthesis
dfo01100
Metabolic pathways
dfo01110
Biosynthesis of secondary metabolites
dfo01230
Biosynthesis of amino acids
Module
dfo_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Dform_01031 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Dform_01031 (trpB)
Enzymes [BR:
dfo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Dform_01031 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
APV44367
UniProt:
A0A1P8F7B7
LinkDB
All DBs
Position
961342..962706
Genome browser
AA seq
454 aa
AA seq
DB search
MDRTKFLLNEKEMPTAWYNIQADLPTPLAPYLHPGTKEPLGPADLAPLFPMELIMQEVSK
ERYIDVPGAVIDIYRSWRPTTLYRAHRLEKALQTPAKIFYKYEGSSPAGSHKPNTAVPQA
YYNKKEGIKRLTTETGAGQWGSSMAFACSQFGIDLKVYMVKVSYQQKPYRRMMMETWGAQ
CVPSPSPDTESGRAALAEDPNNPGSLGLAISEAVEDAAPRADSHYALGSVLNHVLMHQTV
IGLESLKQMEMAGEYPDVVIGCVGGGSNFGGMALPFVHQNLTAGKKTRIMAVEPSSCPSL
TKGTFAFDYGDVAGMAPIAKMFTLGRKFMPPPVHAGGLRYHGMAPIVSHLYKSGLIEAKA
VPQLPTFEAGIQFARTEGFISAPETNHAIRAAIDEAIKCRESGEKKVILFNHSGHGHFDM
AAYDAYLSGKLADFEYPAEMVKEALKDLPQCILR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtacaaagtttcttttgaatgaaaaggaaatgcccaccgcctggtacaacatc
caggctgacctgcctacccctctcgccccctacctgcatccggggacaaaggagcctctt
ggacccgccgatttggcgccccttttcccgatggaactcatcatgcaggaagtttcaaaa
gagcgttatatcgacgtccctggtgctgttatcgacatctaccgaagttggagaccgacg
acactgtatagagctcaccgcttggagaaagcacttcaaacacccgccaagatattctac
aaatacgagggctcttctccagccggcagccacaagccgaacaccgctgtcccgcaggca
tattacaacaagaaagaaggaatcaagcgactaaccactgagaccggcgccggtcagtgg
ggttcctctatggcctttgcctgcagccagttcggcattgatctcaaagtctacatggtg
aaggtgagctaccagcagaaaccttaccgccgcatgatgatggagacctggggcgctcag
tgcgtgcccagccccagcccggacaccgaatcaggccgcgccgccctcgccgaagatccc
aataatcccggcagccttggacttgcgatttcggaagcagttgaagatgccgccccgcgc
gcggatagccactatgcgttgggaagcgtcctgaaccatgtcctcatgcaccagacagtg
atcggtcttgagtcgttgaaacagatggaaatggccggcgaatacccggatgtcgtcatc
ggttgcgtcggcggcggctccaacttcggcggcatggctctgcccttcgtccatcagaac
ctcactgcgggcaagaagacccgtatcatggccgtcgagccttcgagttgtccctctctt
accaagggtaccttcgctttcgattacggcgatgtcgccggaatggcgccgatcgccaag
atgttcactctcggccgcaagttcatgcccccgccggtgcacgccggtggtctgcgctac
catggtatggctcccattgtcagccatctttataagtcagggctcatcgaggccaaggct
gttccgcagctgcccaccttcgaagccgggatccagttcgcccggaccgagggctttatc
agcgcgccggagaccaaccatgccatccgtgccgctatcgacgaagccatcaagtgccgc
gaatcgggagagaagaaggtgatcctgttcaaccactcgggtcacggccacttcgatatg
gctgcttatgacgcctacctatcgggtaaattagccgatttcgagtatccggccgagatg
gtcaaagaagccctaaaagacctgccgcaatgcattctcagataa
DBGET
integrated database retrieval system