Desulfoscipio gibsoniae: Desgi_1876
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Entry
Desgi_1876 CDS
T02657
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgi03009
]
Desgi_1876
Enzymes [BR:
dgi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Desgi_1876
Ribosome biogenesis [BR:
dgi03009
]
Prokaryotic type
ribosomal protein modification factors
Desgi_1876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AGL01324
UniProt:
R4KFF2
LinkDB
All DBs
Position
1911770..1913110
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AA seq
446 aa
AA seq
DB search
MATAIGFISLGCAKNRVDSEIMLGQLRQAGYDITGDINQADVIIVNTCGFITAAKEESIA
AILDAARCKITGRCRVLLVAGCLSQRYGNELLQDLPEIDGVMGTGAVPEIVAVLKRIHAG
ERPLAVSAPGYIHQSQVPRVLTTPNYTAYLKIAEGCDNCCSYCAIPAIRGPYRSRTMDDI
INEARLLCSGGVRELIVAAQETTRYGRDIYGRYALTGLLQKLALIEECRWIRIMYCYPDS
FTEELVELLATSLKICRYVDLPLQHINNRLLRMMNRRGNKESIVKLVDKLRQNIPGVTLR
TTFIVGFPGETEQEFNELLDFMEQVKFERAGVFGYSPEEGTPAEALPGRVSDEVLAERVD
QAMRLQQRISLAHNHNKVGQVLTVLVEGWDDDAKMYWGRTEADAPDIDGRVFFTSRTVAR
EGDFVRVKVLDAAEYDLSGVRTNELA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcaattgggtttatcagcttgggctgtgcaaaaaacagagtggattcggaa
attatgctgggacaactgcgccaggcgggttatgatattacgggcgatattaaccaggca
gatgtaattatcgttaatacctgcggttttatcactgcagccaaagaagaatcaatagca
gctatattggatgcagcccggtgcaaaataaccggtaggtgccgggttctgttggtggcg
ggctgtttgtcccagcgttatggtaatgaattattacaggatttgccggaaattgacggc
gttatgggtactggagcggttccggagatcgtggcagtgctgaagaggatacatgctggg
gaaaggccgctggcggtaagtgcgcccggctatattcatcaaagtcaggtgcccagggtg
ctaactacaccaaattatacagcttacctgaaaattgccgaagggtgtgacaattgctgc
tcttattgtgccattcccgccatcaggggaccttaccgcagccgtaccatggacgatatt
ataaacgaggcacgattgttatgctccggtggggttagggagttaattgttgcggctcaa
gaaaccacccgctatggacgggatatttatggccggtatgcattaaccgggcttttacaa
aagcttgcgctaattgaagaatgccgctggattagaataatgtattgttatcccgattcc
tttacggaagagctggttgaattgcttgctacatctttaaaaatatgtcgttatgtggat
ttgccactacagcatattaataaccggctgctgcgcatgatgaacaggcggggaaataag
gaaagtattgtcaagctagtggacaagctacgccaaaacattcccggcgtaacgttgcgg
actacctttattgttggtttccccggtgaaaccgagcaggagtttaacgaattacttgat
tttatggaacaggtcaagtttgagcgggccggtgtctttggttattcacccgaggagggc
accccggccgaggcactgcctggccgcgtcagtgatgaagtgctggcggaaagggtggat
caggccatgcgtttacagcagcgtatttcgttggcccataaccataataaggtggggcag
gtgcttaccgtgctggtggaaggctgggatgacgatgctaaaatgtactggggcaggaca
gaggctgatgctccggatatagacggcagggtcttttttacatcacgtacagtggcccgg
gaaggagattttgtgcgggtcaaggtgctggatgccgcggaatatgatttatcaggggta
cgtacaaatgaacttgcctaa
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