Desulfoscipio gibsoniae: Desgi_4020
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Entry
Desgi_4020 CDS
T02657
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00071
Fatty acid degradation
dgi00280
Valine, leucine and isoleucine degradation
dgi00310
Lysine degradation
dgi00362
Benzoate degradation
dgi00380
Tryptophan metabolism
dgi00410
beta-Alanine metabolism
dgi00640
Propanoate metabolism
dgi00650
Butanoate metabolism
dgi00907
Pinene, camphor and geraniol degradation
dgi00930
Caprolactam degradation
dgi01100
Metabolic pathways
dgi01110
Biosynthesis of secondary metabolites
dgi01120
Microbial metabolism in diverse environments
dgi01200
Carbon metabolism
dgi01212
Fatty acid metabolism
Module
dgi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Desgi_4020
00650 Butanoate metabolism
Desgi_4020
09103 Lipid metabolism
00071 Fatty acid degradation
Desgi_4020
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Desgi_4020
00310 Lysine degradation
Desgi_4020
00380 Tryptophan metabolism
Desgi_4020
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Desgi_4020
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Desgi_4020
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Desgi_4020
00930 Caprolactam degradation
Desgi_4020
Enzymes [BR:
dgi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Desgi_4020
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Desgi_4020
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Desgi_4020
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
NAD_binding_2
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
F420_oxidored
DUF2523
NAD_binding_8
Methyltransf_31
Glt_symporter
Pyr_redox_2
RST
DAO
Motif
Other DBs
NCBI-ProteinID:
AGL03296
UniProt:
R4KUJ5
LinkDB
All DBs
Position
complement(4084391..4085617)
Genome browser
AA seq
408 aa
AA seq
DB search
MKFKKIGLVGGGIMGAAITQVVASSGLTVVMYEMNEELVQKAMKRIRSAFQREQDKGKIS
KEKLHERLALINGTTSLKEFFDVDLVIEAVPEIMEIKKKVFTSLEQATSPQTILASNTSS
LSISEIASTLKDSQKVIGLHFFNPPQKMKLVEVIPALQTSTKTIETAVDFVRLVGRESVV
VTECAGFLVNRLLVPYFYEAMYTLLDGSAGIQDIDNAAMQYGFPMGPFRLCDFIGIDTLV
HSGRIMEQYYGPRMKPPFLMEEMVRAELLGDKSGGGFYKGNQINPDVLLLIENLKTNSKH
TVAFTTERLIYPMINEAVICLQEKISTPSEIDFAMVSGIGFPKDKGGPLRYADIIGMDSL
TESLDRFAQKISFRFWPSYLLRKMVAAGFNGIKSKQGFYTYLNEVNEN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaaaaaaataggactggttggtggcggtattatgggtgcggccatcactcag
gtggtagcttctagtggcttgacggttgtaatgtatgagatgaatgaagaattagtgcaa
aaagcgatgaaaaggataagatcggcatttcaacgtgaacaggataagggcaaaatttcg
aaagagaaattacatgagagattggccctaattaatggcaccacctctttaaaagagttt
ttcgatgtagatctagttatagaagctgttccagaaattatggaaattaaaaagaaggtc
tttactagtctggagcaagcaacttcgccacaaactattttggccagcaatacatccagt
ctttccataagtgaaatagcatccaccttaaaggattcacaaaaagtaattggattgcat
ttttttaatcccccgcaaaagatgaagctagtggaagtaatccctgccctgcaaacaagt
acaaaaacaattgaaacagctgttgattttgttcgcctggttggcagagaatccgtggta
gtgaccgaatgtgcaggttttctggttaaccgtcttttagttccttacttctatgaagcc
atgtatactcttttggatggttccgcagggattcaggatattgataatgctgctatgcag
tatggttttcccatgggccccttcagattgtgtgattttataggaattgatacccttgtg
cactcggggcggatcatggaacaatattacggccctcgtatgaaacctccctttttgatg
gaagagatggtacgggcagaattacttggcgataaaagcggcggtggtttttataagggt
aatcaaataaatccggatgtgctactgttaattgaaaatttaaaaacaaattccaaacat
actgtagcttttaccacagagcgtttaatttatcccatgattaacgaagcagtcatatgc
ttacaagaaaaaatatcaacaccatcggaaattgatttcgcaatggtatccggtatcggt
tttccaaaggacaaagggggaccgctgcgctacgctgacataatcgggatggatagtctt
acagaaagtttggaccgttttgcccaaaaaattagctttaggttctggccgtcatatcta
ctaagaaagatggtagcagccgggttcaatggaataaaaagtaagcaaggattttatact
tatttaaacgaggtgaatgaaaactga
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