Drosophila grimshawi: 6569252
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Entry
6569252 CDS
T01061
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dgr
Drosophila grimshawi
Pathway
dgr03020
RNA polymerase
dgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6569252
09124 Replication and repair
03420 Nucleotide excision repair
6569252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgr03021
]
6569252
03400 DNA repair and recombination proteins [BR:
dgr03400
]
6569252
Enzymes [BR:
dgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6569252
Transcription machinery [BR:
dgr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
6569252
DNA repair and recombination proteins [BR:
dgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
6569252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
6569252
NCBI-ProteinID:
XP_001995730
FlyBase:
FBgn0125074
UniProt:
B4JXA6
LinkDB
All DBs
Position
Unknown
AA seq
1889 aa
AA seq
DB search
MSTTTDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGVQFAETLEGGRPKLGGLMDPRQGV
IDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPNNP
KIKEIVMKSKGQPRKRLAYVYDLCKGKTICEGGEDMDLAKDNQQVDPNKKPGHGGCGHYQ
PSIRRTGLDLTAEWKHVNEDSQEKKIIVSAERVWEILKHITDEECFILGMDPKYARPDWM
IVTVLPVPPLAVRPAVVMFGAAKNQDDLTHKLADIIKANNELRKNEGSGAAAHVIQENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFITREQVMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTLGTSAGSLLHICFLELGHDIAGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQMAIKKAKDDVINVIQKAHNMELEPT
PGNTLRQTFENKVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGELVEFQNMPT
VKLSNKVFEKRFKFDWSNERYMRKVFADDVIKEITESSVAIQELEAEWDHLVTDRDNLRT
IFRNGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDLSPMRVIRGVSDLLNRCVIVTGNDR
ISKQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVISEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLTMEQIAEKINVGFGEDLNCIFNDDNADKLVLRIRIMNNEENK
FQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGEF
KAIGEWLLETDGTSMMKVLSERDVDPIRTSSNDICEIFQVLGIEAVRKSVEKEMNAVLQF
YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAET
DPMRGVSENIIMGQLPKMGTGCFDLLLDAEKCRFGIEIPNSLGSSMLGGAAIFMGGGSTP
SMTPPMTPWVNCHTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSS
PGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYA
SATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNY
SPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASP
HYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY
SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP
MYSPTAPSHYSPTSPAYSPSSPTFEESDD
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacaacggactccaaggcgccgctgcgccaggtgaagcgtgtacagtttggt
attttgtcacccgatgaaattcgccgcatgtccgttacggagggtggcgtccagttcgct
gagacgctggagggcggccggccaaagctgggcggtctgatggatccgcgtcagggtgtt
atcgatcgaacgtcgcgctgccagacgtgcgcgggcaacatgaccgaatgtccaggccat
tttggacatattgatttggccaagccggtctttcacattggcttcatcacgaaaacgatt
aagatattgcgctgtgtgtgtttctattgctccaagatgctggtgtcgcccaacaatccc
aagatcaaggagatcgtcatgaagtccaaaggtcagccgcgcaaacgtctcgcctacgtc
tacgatttgtgcaagggcaaaacgatttgcgagggtggcgaagacatggatttggccaag
gacaatcaacaggtcgatccgaataagaaaccagggcatggtggctgcggtcactaccag
ccctcgatacgacgcaccggactcgatctaaccgcagaatggaagcacgtcaacgaggat
tcgcaagagaaaaagattattgtttcggcggagcgtgtttgggagatactaaagcacatc
accgacgaggagtgcttcatactgggcatggatcccaaatatgctcgtcccgattggatg
attgtcacagtgttgccagtgccgccgctagcggtgcgtccggctgtcgttatgtttggc
gccgccaaaaatcaggacgatttaacgcacaagcttgcggacatcataaaggcaaacaat
gagttgcgcaagaacgagggcagtggcgccgctgctcatgtcatccaggagaacatcaag
atgttgcagttccacgtggccacgctagtggacaatgatatgcccggcatgccgcgcgcc
atgcaaaagtctggcaaaccattaaaggcgatcaaggcccgactcaagggcaaagaggga
cgtattcgtggcaatttgatgggcaaacgtgtcgatttctcggcccgcactgtcatcaca
ccggatcctaatttgcgtatcgatcaagtgggtgtgccgcgttccattgcacagaatcta
acgttcccagagctggtgacgccgtttaacatcgatcgcatgcaggagctggtgcgtcgc
ggcaactctcagtatccgggcgccaaatacattgtccgtgacaatggtgaacgtatcgat
ttgcgatttcatcccaaatcctcggatttgcatctgcagtgcggctataaggtggagagg
catttgcgtgacgacgatctggtcatattcaatcgacagccgacgctccacaagatgagt
atgatggggcacagggtgaaagtgttgccctggtcaacgttccgcatgaatctgtcgtgt
acatcgccctacaatgctgatttcgatggcgacgagatgaatctccatgtgccccaatcg
atggagacacgcgccgaggttgagaacatacacattacaccgcgtcagattatcacgccg
caggcgaacaaaccggttatgggcattgtccaggatacgctgacagcggtacggaaaatg
accaaacgggatgtgttcataacgcgtgaacaggttatgaatctgttgatgttcctgccc
acgtgggatggcaagatgccgcagccgtgcatcctgaagccgcgtcccctgtggacgggc
aaacagatcttctctctgattatacccggcaacgtgaacatgatccgtacacattcaacg
catcccgatgaggaggatgatggtccatacaagtggatatcgcccggtgacaccaaggtc
atggtcgagcacggtgacctcatcatgggcattctctgcaagaagacactgggcacttcg
gccggctcgctgctgcatatctgtttcctggagctaggacatgatattgctggacgcttc
tacggcaacattcagacggtgatcaacaattggttgctgctcgagggccatagcattggc
attggcgataccattgccgatccgcagacctataacgagatccagatggccatcaagaag
gccaaggacgatgtcatcaacgttatccagaaggcccacaacatggaactcgaaccgaca
ccaggcaacacactgcgacaaacattcgagaacaaggtgaatcgcattctcaacgatgct
cgtgacaaaactggtggttccgccaagaaatccctcaccgaatacaacaatctaaaagct
atggtcgtctccggctccaagggttccaacattaacatctcacaggttattgcttgtgtg
ggtcagcagaatgtggagggtaaacggataccgtacggttttaggaagcgcactctgcca
catttcatcaaggatgattatggtcccgagtcgcgaggtttcgtcgagaactcatatctg
gccggtttgacaccatccgagttctatttccatgcgatgggcggtcgtgagggtctcatc
gatacggctgtgaagacagcggaaaccggttacattcagcgtcgtctcataaaggctatg
gaatcggtgatggtcaattatgatggcaccgttcgtaattctgtcggccaactgattcag
ttgcgttacggcgaggatggcctctgcggcgaattggtcgaattccagaatatgccgacg
gttaagctgtccaacaaggtattcgagaaacgattcaaattcgattggtcgaatgagcgt
tatatgcgcaaagtgttcgccgatgatgtgatcaaggagataacagagagcagtgttgcc
atccaggagctggaggccgaatgggatcatcttgttaccgatcgcgacaatctgcgcacc
attttccgcaacggtgattcgaaagtggtgctgccttgcaatctgcagcgcatgatctgg
aacgtgcagaagatctttcacattaacaagcgactgccgacagatctatcgcccatgcgg
gtgatacgcggtgttagcgatctgctcaaccgttgcgtcatcgttacgggcaacgatcgc
atctcgaaacaggcgaacgagaatgcaacgttgctgttccagtgcctcatccgttcgacg
ttgtgcaccaaatacgtatcggaggagtttcggctgtcgacggaggcctttgagtggtta
atcggtgagattgagacacgtttccagcaggcgcaggcaaatccgggtgaaatggttggc
gccctggctgcccagagtttgggcgagcccgccacccagatgacactgaacactttccat
tttgctggcgtctcatccaagaacgtaacgctgggtgtgcctaggcttaaggagatcatc
aacatatcgaagaaaccgaaagcgccatcgctaaccgtattccttacgggcggcgctgct
cgcgatgcggagaaggcgaaaaatgtgctgtgccgattggagcataccacgctgcgcaag
gtgacagcgaatacggccatctattatgatccggatccgcagcgcactgtcatatcagag
gatcaggaattcgtgaatgtttactatgagatgcccgactttgatcccacacgcatttcg
ccgtggctgctgcgcatcgaactcgatcgcaaacggatgacggacaagaaactgacaatg
gaacagattgctgagaagatcaatgttggctttggcgaagatcttaattgcattttcaac
gatgataatgcggataagttggtgttgcgcatccggatcatgaacaatgaggagaacaaa
ttccaggacgaagatgaggccgttgacaaaatggaggatgacatgtttttgcggtgcatc
gaggccaatatgctgtcggacatgacactgcagggcatcgaggcgattggcaaggtttat
atgcatctgccccaaacggacagcaagaagcgtatcgtcatcacggagacgggtgaattc
aaggcgattggcgaatggctgctggagactgatggcacatcgatgatgaaggtgctctcc
gagcgtgacgtcgatcccatacgcacctcgtccaacgatatttgcgaaatcttccaggtg
ctcggcatcgaggccgtgcgcaaaagtgtcgagaaggagatgaatgctgtgctacagttt
tatggcctgtacgtcaactatcgacatttggcgctgctctgcgatgtgatgacggccaag
ggtcatttgatggccataacacgtcacggcatcaacagacaggatacgggcgccctgatg
cgttgctccttcgaggagactgtcgatgtgcttatggatgcggccgcccatgccgaaacg
gatcccatgcgtggcgtctccgagaacataattatgggtcagttgcccaaaatgggcacc
ggctgcttcgatctgctgctggacgccgagaagtgccgtttcggcatcgagatacccaat
tcccttggtagcagtatgcttggcggtgctgccatctttatgggcggcggttccacgccc
agcatgacgccaccaatgacgccgtgggtcaattgccatacgccgcgctacttctcaccg
ccaggtcacgtgagcgcaatgacgccaggtgggcccagtttctcgccctcagctgcatcg
gatgcgtctggcatgtcaccgagctggtcgccggcacatcccggctcatcgcccagttcg
ccggggccatcgatgtcgccgtatttcccagcttcgcccagtgtgtcgccatcgtattcg
ccgacatcacccaattatacagcatcatcgcccggtggcgcatcgcccaactattcacca
tcgagtccaaattattcaccaacatcgccgctatatacggcgactagtccgcgctatgca
tcggccacacccaatttcaatgcacaatcgacgggatattcaccatcgtcttcgggctac
tcgcccacatcgcccgtctattcgccgacatcaaatttccagtcgagtccatctttcgcc
ggcagtggtagtaatttgtattcgcctggtaatgcctattcgcctagctcatcaaattat
tcacccaattcgccatcgtattcaccaatgtccccatcgtattcaccgtcgagtccatcg
tattcgccaacatcgccctgctattcacccacatcgccatcgtattcaccaacgtccccg
aaatatacggccgtaacgccctcatattcaccgacatcgccaaattattcggcctcgccc
cactattcaccggcatcgccggcatactcacagacgggcgttaaatattcaccaacatcg
ccaacatattcaccgccgtcgccatcgtatgacggttcgccaggttcgccacaatatacg
ccgggatcgccgcagtattcgccggcctcacccaaatattcaccgacatcgccactgtat
tcacccagttcgccgcagcactcgccatcgaatcaatacagtccaacaggatcaacatat
tcggcgacgagtcctcgttactcgccaaacatgtcaatttactcgccgagcagcaccaaa
tattcacccacatcgccaacgtatacgccaacggcacgcaactattcgcccacatcgccg
atgtactcgccaacggctccctcacactacagtcccacgagtcctgcgtattcgcccagc
agtcccacgttcgaggagagtgacgactaa
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integrated database retrieval system
