Dendronephthya gigantea (soft corals): 114535851
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Entry
114535851 CDS
T06112
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114535851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114535851
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114535851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
HALZ
Motif
Other DBs
NCBI-GeneID:
114535851
NCBI-ProteinID:
XP_028412965
LinkDB
All DBs
Position
Unknown
AA seq
2378 aa
AA seq
DB search
MASDLEELEILCRETGLSKAAICNVLNSSESAKSIFKDISEYVSREKAQKEKMINNVQIL
RRARVNADQQFNQLEKQLISCNSKLEHETQSNEILKKNLDETAEALEVKSKRLSEAESLK
DAAVTNYSTVFCENQTLEAEKLTLVATLERKNQEIDRLNEEWKLMSEKVSNANAIQYEAK
AKLDELKSKETSYQLREKRLEQEKDLVTKQRDWFDSLLKKKSEEYFLLRKEQTSTITQLQ
TSLDAKIDEANNLESLSENLKTDNEELKDKTSSLVDKLKEAREHHLKTEEQYKLEIASQS
KLALLYKDTSESSKLKCEELVGAIEELQGLLKEANNGRVEVESKLTESEGNLDRVIKEYD
EKVMNIENELKNANDLLEAARQRGTAPMSAESLAAFSPTAAATSSFLKSGMTLTQIYNQY
VETLDSLEIEKAENGRLKGYLEDILKDIEEKAPLLQQQRKDYEGSLITIDKLTLKLEDAM
KEMEKYSMETSEAVQKSEHLRRENERMKVLTADLASQVKVLLKECEEARGSVVSTTSSIV
LDDLAHSHDEVSSSSEVISSRLVTFRNIEELQEQNQRLLTVVRELSEEKEKDEQKEKSDL
AHTELKQKLDEALNELEELKESRERQTSMVEAVVRQRDMYRVLLANTGQSPITPRQVLDQ
NVLNQSSFEETNEALKELQKQFESYKNEKLSNEKQIKEKNEELRSTISELNIKNATAMSQ
LEHTNERYKLLESNCNSLKREAAALRDKSEKLSLTSAKLETSYETAKQDLSEVKEKLMRS
EVMYQNLVEEKNIVKQAEARLVEENKSLINQQKGQNTLLTNLQTIQNNLERQEYETRSRH
TSQVSALEQEVAILKQKLTSEQDQITKSADSFKSQVGECKRKLKAESELLKEAENKVEAL
QLELNSVKIKLSEKESHLLASETRLNEILARDASEDGPGHEFARRLKEKEEQFSSTVEEI
KGKLYETETRNKVLENQIGLSKKHLDQYKAMLTANEEALSELNKTSKLYQEKAEGEKEDN
VKVMAALQESLTSTQATLANLTSENTELKKQFTDKTASLQKSVEILTSEAREAVKRAEMC
VEKEKRANEICEEQKTLAKETQEKYQKELVHHASDVQALTLAKEQLETFESRLAETEEKR
KNAEGNLNECKASWEEQKNIHKGELEKLVSRCDELKNQNALLHEQGEKLSQQVLAAQSRS
LGDIRVTSETTPESSDAPVDKTVKDLWEVIRFVRKEKEIAETKSELLQSESVRYQQRLEY
VEKQLQDTEEILKKEKERTKSLPIDVAEHEEIMKKVEMVAEIEEMNKVLNNDKETLQNKL
KQTEAQAKRLESDINPLKQSIKNLTAQKDMLVGEKTGLRSEIQRWRSRVNQLIEQCKNQI
DPEEMKKLQEEKKQLVGQQKASTDEAQKLKVRMDAMRNEITRLQAEINVKKTETAKIQEE
LKTAKAENNAAAAKLKEENENFQKELGTKTDEIQEKAKTIIQLKKIAKRYKTQYDETFAQ
KEELSKKLSEEQPSGDVTKQENMITTLTEEKNSLQEEMDKLNQNLKTSKEKEEKSKKTLN
SATKRIQQLMTMKDKYSAECEELKKSLEGLRQEKEALAAASSEREMRLTVLSTQFEGKHA
RMDKELKEKNELIEKYEQEKNESQEKENEKESEIDKLKKKLQQYDRLIRQAQQKIKSQAS
QIAASQGQGNSSSSTVSSGGNEDLNSTQVTTAVPPTAAVKPTATPTNSVPVRSLATPTAS
IRPMTSATVQATPRATVPPTVTTQPAVPTAVTTQPTVSAEPIATLPVSARAQTSATPTVH
PLPSTPVSSSVMTSTTSDVAAVSVRPIMSSSVAIIPTHDVDEERPSDVIIDERPSTSAQI
QSAELRPEDDVPVREDDERPGNKRPRESESTTDQNLGLQEAKKSRTEMQEEIEETTEQLD
EEDVLDVMAEDDNIDVDDNDEERQEEVEEEREVVCIDDDSEEEEAGEDDGQIEADDIDED
DDVVEVIDDDDDEDDDEDDVENDVEDDIDMKEEFADAEEIPAEQSQGPGQEESADSTDVV
IPTTTDAISTSHQEQHSQEPVVTSQSVHPRTQPPFIRSQSHLAPFTLSQSQSGGGGFDET
DDCMVPSTPTLFIPKRSDGFSEMISSPRVQHPSFLFGSTTESSLPQTGGLAMGMTEEGLR
VDDTRFDIMASSGEGDEADLGFDNVVPDLDEAATIDFTSEDDILDPPTMVDIAASGVDVS
EQNVPETSEKFDPVEVTEAVPETSKAPDENVTSQLEQKAEVKDSEEASGSSLVSATTIKP
AEERLVSFADSSKEMDSQESSSTSEPSTSTGKTIVLLTSQENRPSQKSTVVQLRRPGQPQ
TQASRGRRQIRRVQGLGQAIPPTRGLQRRGRGQWPGNQ
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgatttggaagaactggagatattatgtcgtgaaactggactttctaaagct
gcaatatgcaatgttttaaactctagcgaaagtgctaagtctatatttaaagatattagc
gaatatgtctccagagagaaagcgcaaaaagagaaaatgatcaacaatgtccaaattctt
cgacgtgcacgtgtgaatgctgatcaacaattcaatcaattggaaaagcaacttatttca
tgtaacagtaagttggaacatgaaacacagtcaaatgagatattaaagaagaatttagac
gaaacagctgaagctttggaagtgaaatcgaagcgactgtctgaagctgaatctttaaaa
gatgctgctgtaacaaactattcaacagtgttttgtgaaaatcaaacccttgaagcagaa
aagctcacattagtagctacattggagagaaagaatcaagaaattgacagattgaatgag
gaatggaagttaatgtctgagaaagtcagcaatgcaaatgcgatacaatatgaagcaaag
gcaaagttggatgaacttaagagtaaagagacatcatatcagttacgagaaaaaagatta
gaacaagaaaaagatcttgtgacaaaacaaagagattggtttgactcgttgctaaagaaa
aaatctgaagaatatttccttctgaggaaagaacagacttcaaccattacccagttgcaa
acttcactggatgcaaaaattgatgaggcaaataatcttgaatctttgagtgaaaacctg
aagacagacaatgaggagttgaaagacaaaacaagttcccttgttgacaaattgaaagaa
gcccgtgaacatcacttaaagacagaggaacaatataaacttgagattgcttcccaaagt
aaactggcattgctctacaaggacacatctgaaagttcaaaattgaaatgtgaggaactt
gttggtgctatagaggagttacaaggcttgctgaaagaggctaacaatgggcgtgtggaa
gtagagagcaaactgacagaaagtgaaggaaatcttgatagagttattaaagaatatgat
gagaaagtgatgaatattgaaaatgagctgaaaaatgcaaatgacttgttggaagcagca
agacagagaggaactgctccaatgtcagctgaaagtttggcagctttctcgcccactgcg
gctgcaactagttcattcttgaagtctggaatgaccttgacacagatttacaatcaatac
gttgagactctcgattcacttgaaattgaaaaggctgaaaatggccgtttgaagggatac
ttggaggatatcttgaaggatattgaagaaaaagctccattgctccaacaacaacgaaaa
gattacgaaggctctctcattacaattgacaagctaacgttgaaactggaggatgctatg
aaggaaatggagaaatacagtatggagacgagcgaagctgttcaaaaatctgaacatttg
agaagagaaaatgaaagaatgaaagtattgactgctgatcttgcctcgcaggttaaagtt
ttgctgaaggagtgtgaagaagccagaggttctgtagtgagtactacatcaagtattgtg
ttggatgatcttgctcattcacatgacgaggtttccagttcatcggaagtgatttcaagc
agattggtaacattcagaaatattgaagaacttcaagaacagaatcaacggctcttgacg
gtcgtccgggaacttagtgaagaaaaagagaaagatgaacagaaagagaaaagtgatttg
gctcacactgaactaaaacagaaactggatgaagcacttaatgagctggaggaattaaaa
gaaagtcgcgaaaggcaaacttctatggtggaagccgttgtacgtcaaagagatatgtat
cgcgttcttttggcaaacactggacaatcacctataacaccgcgacaagtacttgatcaa
aatgtcttgaatcagtcatcttttgaagaaacaaatgaagcgttaaaggaacttcaaaaa
cagtttgaaagctacaaaaatgaaaagctgtcaaatgaaaaacagatcaaggaaaagaat
gaagaactgcggtcaaccatctcagagttaaatataaaaaatgcaactgcgatgtctcag
ttggagcatacaaatgaaagatacaagttactggagtcaaattgcaacagtttgaaacgt
gaagcggctgcattaagggataaatctgagaaattatctttaacttctgcaaaacttgaa
acatcatacgaaactgccaagcaagatttaagtgaagtgaaagagaaattgatgcgaagt
gaggtgatgtatcaaaatttggttgaagagaaaaatatagttaaacaagcggaagcaaga
ctcgttgaggaaaataaatcgttgataaatcaacaaaaaggacagaatacattgttaacc
aatcttcaaacaatacagaacaatttagaacgacaagagtatgaaacaagatcgagacat
acaagtcaagtttctgctctggaacaagaagtcgctattttaaaacaaaaattaacttct
gaacaagaccagattacaaagtctgctgattcattcaagtcccaagttggtgaatgtaaa
agaaaattaaaagcagaatcagaacttctaaaagaagcagaaaataaggtggaagcactt
cagttagagttgaatagtgttaagataaagttgtctgaaaaagaatcacatttattagcg
agtgaaacgagattgaatgaaattcttgcacgagatgcaagcgaggatggtccaggacac
gagtttgcccgaagattgaaagagaaagaagaacagttttcatcaacagttgaggagata
aaaggaaagttgtatgaaactgagacaagaaacaaagtgctggagaatcagattggactt
tcgaagaaacatttagatcaatataaagcgatgctgactgcaaatgaagaagctctgtca
gagttgaacaagacaagcaaattataccaggaaaaagccgagggtgaaaaagaagacaac
gtgaaagtaatggcggctttacaggaatctctcacatcaacacaagcgacgcttgcaaat
ctaacatcagaaaatacagaattaaaaaaacaatttaccgataaaacagcaagtctacag
aagtcagtggagatattgacgtcagaagcaagggaggctgtgaaacgagctgagatgtgt
gttgaaaaagaaaaaagagcaaatgaaatatgcgaggaacagaaaaccttggctaaagag
actcaagaaaaatatcaaaaagagttggttcatcatgcgtccgatgttcaggctttgact
ttggcaaaagaacagttagaaacatttgaatctcgcttggcggaaacggaagaaaagcgc
aaaaatgccgagggtaatttgaatgagtgcaaagcctcgtgggaagaacagaaaaatata
cacaaaggagagttggagaaactagtttcacgctgtgacgaactgaaaaatcagaacgct
ttactgcacgaacaaggcgagaagctgtctcaacaagtactggccgctcagtctcgttct
ctcggtgacattcgcgtaactagtgaaactacaccagaatcatctgatgctccagttgat
aaaactgtcaaagatctgtgggaagtcatcagatttgtaagaaaagaaaaggaaattgca
gaaacaaagagtgaacttttgcaatctgagagtgttcgatatcaacaacgtttagaatac
gttgaaaaacaacttcaagacacagaagaaatcttgaaaaaggagaaagaaagaacaaaa
tcacttcctattgatgtcgctgaacacgaggaaataatgaagaaagttgagatggtagca
gaaatagaggagatgaataaagttttgaacaatgataaagaaaccttgcaaaataagctg
aaacagacagaagcacaggccaagcgtcttgaaagtgacatcaatccactaaaacaaagt
atcaagaatttgactgctcagaaagatatgttagttggagaaaaaactggactcagaagc
gagattcaacgctggcgttcacgagtgaatcagttgatagaacaatgtaagaaccaaatt
gatccggaagaaatgaagaaattgcaagaagaaaagaaacaacttgtaggacaacaaaaa
gcatcgacggatgaggcacaaaaattgaaagtgagaatggatgctatgaggaatgaaatc
acgagattacaagctgaaattaatgtgaaaaagactgaaacagcaaaaatacaggaagaa
ctgaagactgcgaaggctgagaataatgcagcagcggcgaaactaaaagaagaaaatgag
aatttccagaaggaactgggaactaaaacagatgagatccaggagaaagcaaaaacgatt
attcaattaaaaaagattgctaaacgttacaagacccaatatgacgaaacattcgctcaa
aaagaggaattatccaaaaaactttcagaagaacaaccaagtggtgatgtaacaaagcag
gaaaatatgattacaactttaactgaagagaaaaatagtttgcaggaggaaatggacaaa
ctgaatcagaacctaaaaacaagcaaggaaaaagaagagaaatcgaaaaaaactctaaac
tctgcaacgaaacgaattcaacagttgatgacaatgaaagataaatattctgccgaatgt
gaagaactgaagaaatccttggaaggtcttcgtcaagagaaagaggctttggcagctgca
agcagtgaacgtgaaatgagactgactgttttatcaactcagtttgaaggaaaacatgca
agaatggacaaagaattgaaagagaagaatgagttgatcgaaaaatacgaacaagaaaag
aacgaaagtcaggaaaaagaaaatgaaaaagaaagtgaaatagataagttaaagaagaag
ctacaacagtatgaccgtttaatacgccaggctcagcaaaaaatcaaatctcaggcgagc
caaattgcagcgagtcagggtcagggtaattcatccagttcaactgtaagttcagggggg
aatgaagatctaaacagcactcaagtcactactgctgttccaccaactgctgctgtcaag
ccaacagctactccaacaaactctgtaccagtccgttctttagcaacaccaacagctagt
atacgacctatgacgtcagccacagtccaagccacgccccgtgccactgtgccacccacc
gtcactactcaacccgcagtacctacagcagttacaactcagccaacagtttccgctgaa
cctattgctacattaccagtctctgcacgagcacaaacttctgctacaccaacagttcat
cctctaccatcaaccccagtctcctcctctgtaatgacgtcaactacatcagatgtggct
gctgtatctgtaaggccaatcatgtcgtcaagtgtggctatcataccaacacatgacgtt
gatgaagaaagaccttctgatgttattattgatgaacgtccttcaacttcagcacaaatc
cagtcagcagagttaagacctgaagatgacgtcccagtaagggaggatgatgaacgacct
ggaaacaaacgtccacgtgaaagtgaaagcacaacagatcaaaatttaggacttcaagaa
gcaaagaagtcaagaacggaaatgcaggaagaaattgaggaaacgacagaacaattggat
gaagaagatgttcttgatgtgatggccgaggacgataatattgatgttgatgacaacgat
gaggaaagacaggaagaagttgaagaagaaagagaggttgtatgtattgatgatgatagt
gaggaagaagaagctggtgaagatgatggacaaattgaagcggatgatatcgatgaagat
gatgatgtcgtcgaagttattgatgatgatgatgatgaggatgatgacgaggatgatgtt
gaaaatgatgttgaagatgacatcgatatgaaagaagaatttgctgatgctgaagaaatt
cctgcagaacagtcgcaaggtcctggacaagaagaatctgcagatagtacagatgttgtt
ataccaaccactacggacgcaatatcgacatcacatcaagaacaacattctcaggagcct
gttgtgacatcacaaagtgtccatcctaggactcaaccaccattcattagatcccagtct
catctagcgccgttcaccttgtctcagagccagtctggtggtggtggctttgatgaaact
gatgattgcatggtaccgagtactcccacattattcattccaaaacgatcagatggtttt
agtgaaatgataagttcacctcgtgtgcaacatccatcattcttatttggatcaacaact
gagagcagcttacctcagacaggaggattagcgatgggaatgacggaagaaggtcttcgt
gttgatgatacaagatttgatatcatggcgtcttctggagaaggagatgaagcagatctt
ggttttgataatgttgttccagacttggatgaagccgcgactattgattttacgtctgaa
gacgacatattagatcctcccaccatggtcgacatcgcggcaagtggtgttgatgtttct
gaacaaaatgttcctgaaactagcgaaaaatttgatcctgtcgaagttacagaagctgtt
cctgagaccagcaaggccccggatgagaatgtgacgtcacaattagagcaaaaagcagaa
gtgaaagattctgaagaagccagtggcagttctcttgtctcagcgacaaccattaaacct
gcggaagaacgtttagtttcatttgcagattcttcaaaagaaatggattcccaggaaagt
tcttcaacttcagagccttccacatcaactggcaaaacaatagttttgttaactagtcaa
gaaaaccgcccatcacagaagtccacagttgtgcaactgagaagaccagggcaaccccag
actcaagcatccagaggccgcaggcagatacgaagagttcaaggactaggtcaagcaatc
ccaccaacaagaggtttacaacgccgaggcagaggtcagtggcctggaaaccagtaa
DBGET
integrated database retrieval system
