KEGG   Debaryomyces hansenii: DEHA2C07546g
Entry
DEHA2C07546g      CDS       T01026                                 
Name
(RefSeq) DEHA2C07546p
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
dha  Debaryomyces hansenii
Pathway
dha03020  RNA polymerase
dha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DEHA2C07546g
  09124 Replication and repair
   03420 Nucleotide excision repair
    DEHA2C07546g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dha03021]
    DEHA2C07546g
   03400 DNA repair and recombination proteins [BR:dha03400]
    DEHA2C07546g
Transcription machinery [BR:dha03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     DEHA2C07546g
DNA repair and recombination proteins [BR:dha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DEHA2C07546g
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 2900678
NCBI-ProteinID: XP_458009
UniProt: Q6BUW0
LinkDB
Position
C:669937..670872
AA seq 311 aa
MDIDKGSDTGPRVTIRHTDKEHVDFILKDVDLAMANSMRRTMLAEVPTLAIDLVEIEVNT
SVLADEFISHRLGLIPLNSEGIDNLSYSRDCTCDQYCANCSVKLELTAKCDTDSTMSVYS
SDLAKFHNGSKLGDPVARDNHRKGPLICKLRKHQELRITCIAKKGIAKEHAKWSPCGAIG
FEYDPWNKLKHTDYWYEDDADEEWPKSANCDWEEAPDADAPFDYKAKPSTFYMDVETVGN
LPPNEVILKGIETLQLKLAGISMELNKDSIEASNAAAGGFTTYGRSPGGNSPGMGNSPYG
GDSGFGNSTWG
NT seq 936 nt   +upstreamnt  +downstreamnt
atggatatagataaaggaagtgacacgggtccaagagtgactataagacatacggataaa
gagcatgttgattttatattgaaggatgtcgatttagcgatggcaaattctatgagaaga
acgatgttggcagaagtgcctacattagctatagaccttgttgaaatcgaggtgaatacg
tcagtgttagcagatgaattcatttcgcatagattggggttaataccattgaatagtgaa
ggtatcgacaatttatcgtattctagggactgtacctgtgatcagtactgtgctaattgt
tcggtgaagttagaactaactgctaagtgtgatacagattcgaccatgagcgtatattcg
tctgatttggctaagtttcataatggttcgaaattgggggaccctgtggctcgtgataat
catcgtaagggaccacttatttgtaaattaagaaagcatcaggaattaagaataacttgt
attgccaagaagggtattgctaaggaacatgccaaatggtcgccttgtggtgccatagga
tttgaatacgacccttggaacaagttgaaacatacagactactggtacgaagatgatgcg
gatgaagaatggccaaaatcggctaactgtgactgggaagaagctcctgatgcagacgct
ccgtttgactataaggcaaagccatcgaccttctatatggatgttgaaacagttggcaat
ttacctcctaacgaagttattttaaagggtatcgagactttacaattgaagcttgcgggt
atttcgatggaattaaataaagacagtatagaagccagcaatgctgctgccgggggtttt
acgacatacggtagatcgcctggaggaaattctccaggaatgggtaactctccttatggc
ggggatagtggctttggtaattctacatggggttaa

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