Delftia sp. HK171: BO996_13240
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Entry
BO996_13240 CDS
T04584
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dhk
Delftia sp. HK171
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dhk03009
]
BO996_13240 (rimO)
Enzymes [BR:
dhk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BO996_13240 (rimO)
Ribosome biogenesis [BR:
dhk03009
]
Prokaryotic type
ribosomal protein modification factors
BO996_13240 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
APE48740
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Position
2934980..2936368
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AA seq
462 aa
AA seq
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MTTPAGAAAPRVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIVNTCGFIDD
AVRESLDTIGEALAENGKVIVTGCLGAKAGKDGGNLIQEVHPSVLAVTGPHATQEVMNAV
HTHLPKPHDPFIDLVPGAFGEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRP
VGDVLKEARALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVQTLAEIA
EPYGAWVRLHYVYPYPSVDEIIPFMATGRVLPYLDVPFQHSHPDVLKRMKRPANGERNLE
RLQRWREICPDLVIRSTFIAGFPGETEQEFEHLLQFLREAQIDRAGCFAYSPVEGAAANE
IPGMLPLEVREERRARFMAVAEEVSTARLQKRVGQTMQVLVDKSVGLGKKGGVGRSYADA
PEIDGLVHLLPPEKASKTYKVGDFVKARIVGTQGHDLVGQPV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccctgcaggcgcggccgctccgcgcgtgggcttcgtgtctcttgggtgcccc
aaggcactcacggactccgaactcatccttacccagctcagcgccgagggctaccagacc
tccaagaccttcgagggcgctgacctggtgatcgtcaacacctgcggcttcatcgatgac
gccgtgcgcgagagcctggacaccattggcgaggcgctggccgagaacggcaaggtcatc
gtcacgggctgcctgggtgccaaggcgggcaaggatggcggcaacctgatccaggaagtg
catcccagcgtgctggccgtgaccggtccgcacgccacgcaggaggtgatgaatgccgtc
cacacccatctgcccaagccgcacgatcccttcatcgacctggtgccgggcgcctttggc
gaggcgggcatcaagctcacgcccaggcactacgcctacctgaagatttccgagggctgc
aatcaccgctgcaccttctgcatcattccctccatgcgcggcgacctggtttcgcgtccg
gtaggcgatgtgctcaaggaggcgcgtgcgctgttcgagggcggtgtcaaggagctgctg
gtgatcagccaggacacctcggcctatggcgtggatgtgaagtaccgcacgggcttctgg
gacggcaagccggtcaagacgcgcatgctcgaactggtgcagacgctggccgagatcgcc
gagccctatggcgcctgggtgcgcctgcactatgtctacccgtatcccagcgtggacgag
atcattccgttcatggccacgggccgcgtgctgccctatctggacgtgcccttccagcac
agccatcccgatgtcttgaagcgcatgaagcgccccgccaacggcgagaggaacctggag
cgcctgcagcgctggcgcgagatctgcccggatctggtgatccgctccaccttcatcgcg
ggcttccccggcgagaccgagcaggagttcgagcacctgctgcagttcctgcgcgaggcg
cagatcgaccgcgcgggctgctttgcctacagcccggtcgaaggcgctgccgccaacgag
attcccggcatgctgcccctggaagtgcgtgaggagcgccgcgcgcgcttcatggccgtg
gccgaagaggtttccactgcgcgcctgcaaaagcgcgtgggccagaccatgcaggtgctg
gtggacaagtccgtgggcctgggcaagaagggtggcgtgggccgcagctatgccgatgcc
cccgagatcgatggcctggtgcacctgctgccgcccgagaaggccagcaagacctacaag
gtgggcgacttcgtgaaggcgcgcatcgtgggcacgcagggccacgacctggtgggccag
cctgtgtaa
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