Dissulfurimicrobium hydrothermale: LGS26_02385
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Entry
LGS26_02385 CDS
T07882
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dhr
Dissulfurimicrobium hydrothermale
Pathway
dhr00540
Lipopolysaccharide biosynthesis
dhr01100
Metabolic pathways
dhr01250
Biosynthesis of nucleotide sugars
Module
dhr_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LGS26_02385 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dhr01005
]
LGS26_02385 (rfaD)
Enzymes [BR:
dhr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LGS26_02385 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
dhr01005
]
Core region
LGS26_02385 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
VPS51_Exo84_N
LisH_2
Motif
Other DBs
NCBI-ProteinID:
UKL14119
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Position
complement(507981..508952)
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AA seq
323 aa
AA seq
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MILVTGGAGFIGSSIVWRLNTLGEDRVIIVDELGHDEKWKNLVGLNYYDFINKDEFIDKI
KAGLNFDARSVIHMGANSSTTEKDADHLLRNNYEYTKKLAQYCLERDIRFIYASSAATYG
DGSLGFDDSEDLCRLLRPLNMYGYSKNLFDIWAVKKGVIGRIVGLKYFNVFGPNEYHKGD
MRSVVHKAFEQIMDTGRVKLFKSRNPHYKDGEQMRDFIYVKDAVDMTLFFLDKKEKNGLF
NVGSGRARTWNDLVTAIFNALDRPVNIEYIDLPEHLAGKYQYFTEARLEKIKRAGYSNPI
TTLEDGVTDYVKNYLLKNKYFGF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ttgatacttgtaaccgggggcgcgggttttataggcagctcgatagtctggagattgaac
acccttggagaagacagggttattattgtcgatgagcttggccatgacgaaaaatggaag
aatcttgtcgggctgaactattacgattttataaataaagacgaatttatagacaaaatc
aaggccgggctgaactttgacgccagatccgttatccatatgggggcaaactcatccaca
acagaaaaagacgccgaccacctactccgaaacaactatgaatatacaaaaaaacttgca
caatactgccttgaaagggatatcagatttatctacgcctcttccgctgccacatacggc
gatggctcccttggctttgacgacagcgaagacctgtgccgtcttctgcgccctctcaat
atgtatggctattctaaaaacctctttgatatctgggctgttaagaaaggggtcataggc
aggatcgtcggtttgaaatatttcaatgtgttcggccctaatgaatatcacaaaggagat
atgcgcagcgtggtccataaggcattcgaacagatcatggatacggggagggtgaagcta
ttcaaatcgaggaatccgcactacaaagacggtgagcagatgcgcgattttatttacgtt
aaagacgccgttgatatgaccttgttctttctcgataaaaaagaaaaaaatgggctgttc
aacgtgggttcgggcagggcgcgcacatggaacgacttggtgaccgcgatattcaacgcc
ctggacaggcctgtaaatatcgaatatatcgaccttcctgagcatcttgcgggaaaatat
caatactttaccgaggcaagactcgaaaagataaaaagggccggttactcaaatcccata
actaccttggaagacggcgtaactgattatgttaaaaactatcttttgaaaaataagtac
ttcggattttag
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