Dickeya poaceiphila: Dpoa569_000107
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Entry
Dpoa569_000107 CDS
T06188
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dic03009
]
Dpoa569_000107 (rsmD)
Enzymes [BR:
dic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
Dpoa569_000107 (rsmD)
Ribosome biogenesis [BR:
dic03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dpoa569_000107 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
RrnaAD
Methyltr_RsmB-F
Methyltransf_16
Motif
Other DBs
NCBI-ProteinID:
QDX28496
UniProt:
A0A5B8HF37
LinkDB
All DBs
Position
complement(125356..125979)
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AA seq
207 aa
AA seq
DB search
MAKHQATSAPGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIAHSRCLDC
FAGSGALGLEALSRAASHATLLEAERNVARQLTQNLALLRAGNAEVVNTDTLQWLAKPAS
TQPFDVVFLDPPFRCGLLDDTLRLLEAGNWLAEEAWVYIETEAENRLLTIPPTWTLHREK
TAGQVSYRLYIRHASDATPGGNDEHWD
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacatcaagcgacatccgcacccggtcaaatccgcatcattggcggccagtgg
cgcggcagaaaacttcccgtgccggatagccccggtttgcgccccaccactgatcgcgta
cgcgaaaccctgttcaactggctcgctccggtgattgcgcactcacgctgtctggactgt
tttgccggtagcggcgcgctggggctggaagcgctgtcgcgggcagcctctcacgccacg
ctgctggaggccgagcgcaacgttgcacgtcagctgacgcaaaatctggctctactgcgt
gccggcaacgccgaggtggtgaataccgatacgctgcaatggctggctaaaccggcttcg
acgcagcctttcgacgtggtgtttcttgacccgccgtttcgctgcggcctgttggatgac
acactgcgactgctggaagcgggtaactggctggcagaagaggcctgggtctatattgaa
accgaggcggaaaatcgcctgttaactatcccgccgacctggacgctacatcgggaaaaa
accgcagggcaggtttcctaccgcctttatatccgtcacgcgtctgacgcaacgccggga
ggcaacgatgagcattgggattaa
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