Desulfofundulus kuznetsovii: Desku_2388
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Entry
Desku_2388 CDS
T01499
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dku
Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dku03009
]
Desku_2388
Enzymes [BR:
dku01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Desku_2388
Ribosome biogenesis [BR:
dku03009
]
Prokaryotic type
ribosomal protein modification factors
Desku_2388
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AEG15923
LinkDB
All DBs
Position
complement(2391096..2392421)
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AA seq
441 aa
AA seq
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MSYRVGMVSLGCAKNLVDTELMLGQLDAAGFIITPRPEEADVLLVNTCGFITPAKEESID
QILDLSQYKKSGRCRVLLVTGCLAQRYPGELLDEMPEIDGVLGTGMVDRVVDVVRRALAG
ERVLAVGEPGFDYDAGLPRIRTTAEHTAYVKIAEGCSNCCTYCAIPSIRGPYRSRTLESI
RQEVEALAAGGVKEIILVAQDTTRYGLDLYGERKLAPLLRSLNGISGIRWIRVLYGHPDG
ITAELIDVFSSCDKICRYIDLPLQHASPAVLARMGRGSSASRLRELVHKLRRAIPGLTLR
TTFMVGFPGEREEDFQQLLDFMREMRFERAGVFKFCAEEGTPAAAMTGQVPEEVKEERYH
RAMALQQQISLEHNRSLVGSLVSVLVEGKKGSRYFGRTQADAPEIDGRVYFTAGRVTPSP
GDFVLVKITRAGEYDLMGELA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccgcgttggcatggtcagtctgggttgtgcgaaaaacctggtggatacggaa
ctaatgttgggacagctggatgcggccggatttatcatcacaccccgtcccgaagaggcg
gatgtcctgctcgttaatacctgcggttttattacccccgccaaggaagaatccatcgac
cagatcctggacctgtcacagtacaaaaaaagcgggcgctgccgggtgctcctggtgacc
ggttgcctggcccagcgttaccctggggaactgttggatgaaatgcccgaaatcgacggc
gttttaggtaccggaatggtcgaccgggtggtggacgtggtccggcgggctctggccggg
gagcgggttttagccgtaggggagcccggttttgattatgatgccggcctgccccggatt
agaaccacggcggagcatacggcctatgtaaaaattgccgaaggctgcagcaactgctgt
acttactgcgccatcccctctatccggggtccttatcgcagccgcaccctggaatccatc
cggcaagaggtggaagccctggctgctgggggggttaaagagattatcctggtggcccag
gatactacccgctatggtcttgatctttacggggagcggaagctggccccgctgttgcgt
tccctgaacgggatatccggcatacgctggatccgcgtgctttacggccatcccgacggg
attaccgctgaattgatcgatgttttttcatcttgcgataaaatctgccgctatatcgat
ttgcccctgcagcacgccagtccggcagtgctcgcccgcatggggcggggcagtagcgcc
tccaggctgcgggagctcgtccataaactgcgccgggctattcccgggttaaccctgcgc
actactttcatggttggttttccgggagaaagggaagaggactttcaacagttgcttgac
tttatgcgcgagatgcgttttgaaagggcgggagtatttaaattctgtgccgaggaaggt
acaccggctgctgccatgaccggtcaagtgccggaagaagttaaagaagaacgctaccac
agggccatggctttgcaacagcaaatatccctggagcacaaccgttccctggtgggtagc
ctcgtgagcgttctggtggaagggaaaaagggcagccgttattttggccgtacccaggcc
gacgctcccgaaatagatggccgggtgtactttactgccggccgtgtgactccaagcccg
ggtgattttgtgctggtaaagattacccgggccggtgagtacgacttgatgggggagctc
gcatga
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