Dickeya lacustris: O1Q98_09870
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Entry
O1Q98_09870 CDS
T08984
Symbol
kdsD
Name
(GenBank) arabinose-5-phosphate isomerase KdsD
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00540
Lipopolysaccharide biosynthesis
dlc01100
Metabolic pathways
dlc01250
Biosynthesis of nucleotide sugars
Module
dlc_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
O1Q98_09870 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dlc01005
]
O1Q98_09870 (kdsD)
Enzymes [BR:
dlc01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
O1Q98_09870 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
dlc01005
]
Lipid A
O1Q98_09870 (kdsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
WFN57460
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All DBs
Position
2174494..2175516
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AA seq
340 aa
AA seq
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MSQDHQTQISSQKNRFDFQAAGRQVLSIERDSLAQLDRYIDDNFSRACEQMFACHGKVVV
MGMGKSGHIGCKMAATFASTGTPAFFVHPGEASHGDLGMITRQDIVLAISNSGESHEILA
LIPVLKRLQICLICMTGNPDSTMAKTADIHLCISVPQEACPLGLAPTSSTTATLVMGDAL
AVALLQARGFTAEDFALSHPGGALGRKLLLRVNDIMHRDDEVPRVNKDASLRDALLEITR
KNLGMTVICGPDSNGLHNDHIEGIFTDGDLRRVFDMNINLNNARITDVMTRGGIRVTPQM
LAVDALNVMQSRHITSLLVAENDRLLGIVHMHDMLRAGVV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaccatcaaacacagatatccagtcaaaagaaccgttttgattttcaggcc
gcagggcggcaggtgttatcaatcgagcgtgatagcctcgcgcaattagataggtacatt
gatgacaacttttcccgcgcctgtgagcaaatgttcgcctgccacggtaaggtcgtggtg
atgggcatgggtaaatcgggtcatattggctgtaaaatggccgcgacctttgccagcacc
ggtacaccggctttttttgtccatcccggcgaggccagtcacggcgatctggggatgata
acccggcaagatatcgtgctggcgatttccaattctggcgaatcccatgagattctggca
ttaattccggtgcttaagcgcttgcagatatgccttatctgcatgaccggcaacccggac
agcacgatggcgaaaaccgccgacattcatctgtgtatcagcgtgccacaagaagcctgc
ccgctggggctggcaccgacatccagcaccaccgccacgctggtgatgggggatgctctg
gcagtcgctctgctgcaagcacgtggctttactgccgaagatttcgcactgtcgcacccc
ggcggcgcacttggccgcaagctgctcttgcgggttaacgatattatgcaccgcgatgac
gaggtgcctcgcgtcaataaagacgcctcgctgcgcgacgcgctgctggaaattacgcgt
aagaatctcggcatgacggtgatttgcggcccggacagtaacggccttcacaacgatcat
atcgaaggtatctttaccgacggggacttgcgccgggtctttgatatgaacatcaatttg
aacaatgcgcgtattactgatgtgatgacccgtggcggcattcgtgtcacaccgcaaatg
ttggctgtcgatgcgctcaatgtgatgcaatcgcgccacattacttcattgctggtggca
gagaacgatcggctgttgggaattgttcacatgcacgatatgctgcgtgccggcgtggta
taa
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