Dickeya lacustris: O1Q98_17105
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Entry
O1Q98_17105 CDS
T08984
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00730
Thiamine metabolism
dlc01100
Metabolic pathways
dlc01240
Biosynthesis of cofactors
dlc04122
Sulfur relay system
Module
dlc_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
O1Q98_17105 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
O1Q98_17105 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlc03016
]
O1Q98_17105 (thiI)
Enzymes [BR:
dlc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
O1Q98_17105 (thiI)
Transfer RNA biogenesis [BR:
dlc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
O1Q98_17105 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
DUF5334
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
WFN55311
LinkDB
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Position
3779740..3781188
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDENQR
EVIRDALTRIPGIHHILEVEDCAYTDVHHIFEQVLATYRAQLEGKTFCVRVKRRGKHDFS
SQDVERYVGGGLNQHIESARVNLSAPQVTVHLEIDQDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSSVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQTAHYLWNRFGSSHRVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASRIAERYGVEALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIRLARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EHEESLFDFSILDRVVEQARNIDIREIAEQTKQDVAQVETVGEFATSDVLLDIRSPDEQD
DRPLVMDGVEVKALPFYKLSTQFGDLDQSKTYLLYCERGVMSRLQALYLHEQGFTNVKIY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcggttg
cgctttataaaaattcttaccggtaacatccgtaacgttttaaaacactatgacgaaaca
ctggcggttgtccgtcattgggatcatatcgaagttcgcgccaaagatgaaaatcagcgc
gaggttattcgtgatgcgctaacgcgtattccgggtatccatcatattcttgaggtggaa
gactgcgcctacacggatgttcaccatatttttgaacaagtgttggcgacctatcgcgca
cagcttgagggcaaaaccttttgcgtgcgggtgaaacgtcgcggtaagcatgattttagc
tcgcaggacgttgagcgctatgttggcggtggcttgaaccagcacatcgagagtgcgcgg
gttaacctcagtgcgccgcaagtcacggtacatttggaaattgatcaagaccgtttgcta
ctgattaaaggtcgctacgaaggcattggtggtttccccatagggacgcaagaggatgtg
ctgtcgctgatttccggcggatttgattccagcgtttccagttatatgttgatgcgtcgc
ggttgccgcgtgcattactgtttcttcaatctcggcggcgcggcccatgaaattggcgtg
cgccagacggcgcactatttgtggaatcgctttggcagttcacaccgtgtgcgctttgtc
gctattgattttgagccggttgttggcgagattctggaaaaagtcgatgacggccagatg
ggcgtggtattgaagcgtatgatggtgcgtgcggcttcgcgtattgccgagcgctatggc
gttgaagcgctggtgactggcgaagcgttagggcaggtatcaagccagacgctgaccaat
ttacggctgattgataacgcctcagatacgctgattctacgcccgctgatttctcacgat
aaagagcacattattcgtctggcgcgtgaacttggtactgaggattttgccaaaacgatg
ccggaatactgcggggtaatttctaaaagcccgacggtaaaagcggtgaaagccaaaatc
gagcatgaagagagtttgtttgatttctctatcctcgatagggtggttgagcaggcgcgt
aatattgatatccgcgagattgccgaacagacgaaacaggatgtggcgcaagtggaaacg
gttggcgaatttgcgaccagcgatgtgctgctcgatatccgctcgccagatgaacaggac
gatcgcccattggtgatggacggcgttgaggtgaaagcgttgccgttctacaaactgagc
acccagtttggcgaccttgaccagagcaaaacatacctgctgtattgcgagcgcggtgtg
atgagccgtttgcaggcgctttatctgcatgagcagggctttactaatgtgaagatttat
cgcccataa
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