Deinococcus metallilatus: E5F05_07805
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Entry
E5F05_07805 CDS
T09847
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dmb
Deinococcus metallilatus
Brite
KEGG Orthology (KO) [BR:
dmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmb03009
]
E5F05_07805 (rimO)
Enzymes [BR:
dmb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E5F05_07805 (rimO)
Ribosome biogenesis [BR:
dmb03009
]
Prokaryotic type
ribosomal protein modification factors
E5F05_07805 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QBY07864
UniProt:
A0AAE5YRJ1
LinkDB
All DBs
Position
complement(393426..394883)
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AA seq
485 aa
AA seq
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MTSTQEPLPTVAAPKVGFISLGCPKALVDSERILTQLRAEGYEVAPSYEDAQAVIVNTCG
FITPAVEESLSAIGEALDATGRVIVTGCLGERPEKILERHPKVAAITGSEAVDDVMGHVR
ELLPVEMDTFTGLLPVAAPGMRQGDALAPSVKLTPRHYAYVKIAEGCNHTCAFCIIPKLR
GRQVSRDAGAVLYEAYRLIAGGTKELMIISQDTSAYGVDVRYRESEFQGGQVRAHLTDLA
EKLGEMGAWVRMHYVYPYPHVERIVELMSQGKILPYLDVPLQHASPAVLKRMRRPGAGKQ
LDTIRRWREICPDLVIRSTFIVGFPGETEEDFQMLLDFLEEARLDRVGAFTYSDVEEADA
NALDGAVPEEVKQERLARFMEVAQRISAEKLAEKVGRVMDVIIDEFNDDEGDLPGTRLIG
RTKGDAPGIDGQVYLYAGDFAGSVKIGDMVRARIEDSDEYDLYGEVVARPEWRPNVPQLG
HFGKH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtacgcaagaaccgctgcccacggtggcagcccccaaagtagggttcatcagc
ctgggctgccccaaggcgctggtggacagcgagcgcatcctgacccagctccgcgccgag
ggctacgaggtcgcgccgagttacgaggacgcgcaggccgtgatcgtgaacacctgcggc
ttcatcacccccgccgtcgaggagtccctcagcgcgattggcgaggcgctggacgccacc
ggcagggtgatcgtgaccggctgcctgggcgagcggcccgagaagattctggagcggcat
cccaaggtcgcggcgatcaccgggtcggaagcggtggacgacgtgatggggcacgtgcgc
gagttgctgccggtcgagatggacaccttcacgggcctgctgccggtcgccgcgccgggg
atgcggcagggggacgccctggcccccagcgtgaagctcacgccccggcactacgcctac
gtgaagatcgcggagggctgcaaccacacctgcgcgttttgcatcatccccaagctgcgc
gggcggcaggtcagccgcgacgcgggcgccgtgctgtacgaggcgtatcgcttgatcgcg
ggcggcaccaaggaactcatgatcatctcgcaggacaccagcgcctacggcgtggacgtg
cgctaccgcgagtccgaattccagggcgggcaggtccgcgcgcacctcaccgacctggcg
gagaaactgggcgagatgggcgcctgggtgcggatgcactacgtctacccttacccacac
gtggagaggatcgtggagctgatgagccagggcaaaatcctgccttacctcgacgtgccc
ctccagcacgcttcccccgccgtcctgaagcggatgcggcggcccggtgccggaaaacag
ctcgacaccatccgccgctggcgggaaatctgccccgacctcgtcatccgctccaccttc
atcgtgggctttcccggcgagacggaggaggacttccagatgctgctggactttctggaa
gaggcgcggctggaccgcgtcggcgccttcacctattccgacgtggaggaggcggacgcc
aacgcccttgacggtgccgtgcccgaggaggtcaagcaggaacgcctcgcccgcttcatg
gaagtcgcgcagcgcatcagcgccgagaagctggcggagaaggtgggccgcgtcatggac
gtgatcatcgacgagttcaacgacgacgagggcgacctccccggcacccggctgatcggg
cggacgaagggcgacgcgccgggcatcgacgggcaggtgtacctgtatgcgggcgacttc
gccgggtcggtcaagatcggggacatggtccgcgcccgcatcgaggacagtgacgagtac
gacctctacggcgaggtggtggcgcggcccgagtggcggcccaacgtgccgcagctgggg
catttcgggaagcactga
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