Daphnia magna (water flea): 116919699
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Entry
116919699 CDS
T07514
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116919699
Enzymes [BR:
dmk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
116919699
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
116919699
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
SPL
Motif
Other DBs
NCBI-GeneID:
116919699
NCBI-ProteinID:
XP_032781601
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Position
LG3:complement(86393..88982)
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AA seq
561 aa
AA seq
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MSVCDDDWLDDIEDIVGEGDLTGLERSIARSNAVGKRVKKVPSCKDPAKANHIDHPSEKN
GSIIPGTQKIWVKTWGCAHNSSDSEYMAGQLAAYGYLLTDAKYEADLWLLNSCTVKTPAE
DHFKNEIDDGRARGTPVVVAGCVPQGQPKANYLQGLSIIGVQQIDRVVEVVEETLKGHSV
RLLGTKKDAEKKKAGGASLLLPKIRKNPLIEIIPINTGCLNQCTYCKTKHARGELGSYPP
EEIVARAIQSFQEGVCEIWLTSEDTGAYGRDIGTSLPELLRQLVRVIPDGCMLRLGMTNP
PYILEHLEAIAEILNHPRVYAFLHLPVQSGSDAVLSDMKREYCVADFERVVNFLRDRVPG
ISIATDIICGFPTETEQDFDSTMELCSKYRFPSLFINQFFPRQGTPAYRMERVPTKQVKN
RTKRLSELFKSYQPYDSQVGQRQSILVTDISHDKNYYVGHNKEYVQVLVPMDPDYMGKMV
DVLIVSASKFSLMSEPLTSPKRPDVPEALEKGQISGLVTESHSSSNDSLSSHMISPLWPL
LGLSVVVGLRLAWIIYGRGRR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctgcgacgatgactggttggacgatatcgaagatattgtaggagaaggagac
ttgacgggattggaaagatctatagccaggtctaatgcagttgggaaacgagttaagaaa
gtccccagttgcaaagatccagcaaaagcaaaccacattgatcatccatcggagaaaaat
ggaagcattattcctggaacccaaaaaatctgggtgaaaacttgggggtgtgcacacaat
agttctgactctgagtacatggcaggccaactcgcagcctatggctatttgttgacagat
gccaaatatgaagcagatttgtggcttctgaactcatgcactgtcaaaacaccagcagaa
gatcattttaaaaatgaaattgatgacggaagagctagaggtacaccagttgtcgtagca
ggatgtgttccacagggacaaccaaaagcaaactatttgcaagggttgagcatcatcggc
gttcagcaaatagacagggtggtcgaagttgtagaggaaactctgaaaggtcattctgtg
cgtcttttgggcacgaaaaaggacgcagaaaagaagaaagccggaggagcatcgttgctg
ttgcctaaaattcgcaagaatccattgatagaaatcatcccaatcaataccggttgcttg
aatcagtgcacctactgcaagacgaagcatgctagaggagaactgggcagttatcctccg
gaagaaatcgtagctcgtgcaattcaatctttccaagaaggcgtttgtgaaatttggttg
acatcagaagatacaggcgcttacggcagagatattggcacttccttgccggaactcttg
agacaacttgttcgagtgattccagatggatgtatgctccgattaggcatgactaatcct
ccctatatcttggaacatctcgaggcgattgccgagatcctgaatcatcctcgagtttat
gccttccttcatttacctgttcagtccggaagcgatgccgtcctgtctgacatgaagcga
gaatattgcgtagcggactttgagagagtagtgaattttcttcgtgatcgcgtaccaggc
atatcgatcgccacggacatcatttgtggtttcccgaccgagaccgaacaagattttgat
tctacgatggaactttgttctaaatatcggtttccaagtttattcattaatcaattcttt
ccacgacaaggcacgcccgcctatcgcatggaacgtgtcccaaccaaacaggttaaaaat
cgaaccaaaagactgagtgaattgttcaaatcttatcagccatacgacagtcaagttggt
caacggcagtcgattctggtaactgacatatctcacgacaagaattactacgtcggccac
aacaaggagtacgtccaggtgctggtaccaatggatcctgactacatggggaaaatggtg
gatgttcttatcgtttctgcaagtaagttttcgctaatgagcgaaccactgactagtccc
aaacgtcccgacgtgcctgaagctctggaaaaaggtcaaatatccggactggttactgaa
agccacagcagctctaatgattcgctatccagccatatgattagtccattgtggccgttg
ttgggactctcagtcgttgtcggcctaaggttggcctggattatatacgggcgcggacgt
cggtaa
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