Daphnia magna (water flea): 116923868
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Entry
116923868 CDS
T07514
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116923868
03036 Chromosome and associated proteins [BR:
dmk03036
]
116923868
Enzymes [BR:
dmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
116923868
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116923868
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116923868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
116923868
NCBI-ProteinID:
XP_032786331
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All DBs
Position
LG1:5738417..5742587
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AA seq
1178 aa
AA seq
DB search
MWTRTDANVNLFNDFILVMETLEEKQMHIINPVLTRMKSLEDRMLVKKESDSSWILCIYN
RLLSHENIQVIKWGLHNLCQLNIESWPGIGHSDWLYDALLMGLNNMVFYVRDKACQLPQL
GIDLGQFLQKCATLEIEREGFFIRLLGKMSLVPWNAVGLFHLVYAFASLPRSAILDGEAL
QIVLEFLRSALHTHHPLLRGAIQGLILEFVLNMTVVSQENLLWIALILATINPHECYIRT
TPLYATLKAWINENFTSVQHGQLLDQLLSMHFEPSGDVRIPYSVDVTAVARFAVLLLDVE
TTDLEGMRQMQIRLEPLADCQTRLYADPRTLNQRMKLMVTLLDEVRSSNSTAVVRLVFPF
TESVIHYCLDQIESAANYNSICESLSVLRSIAKMDDLIGVIAASGKKLEMMARKLLDGCS
ALEKFKSISIFYLIARFNQPLVDQFIHEMISLKMHCRAPQRDDSALEYVTWGAFMSHYFS
ELWTLIQQRLAFMEPKLNPEELLNEAICAMDIAGVEAVKSIFSCLGHLLPQVCQSNPDLC
LSSLKACWTVCFEYRRSDHFWDLMEQFAKIAFNNSLMEKPEIRPQLFGFLSELKSQGENI
LQLFNFSAERIIDIWTTTAFPSNDSYTIQFIVDLISFGLIHRRDEMIFFETCAFVRSLGE
RCPANIHLRSEDMADGKVRFQGLRFLLSLNKLNEQHMAMVESLVEALLKEDKTMSETKTR
YFSSSHGHRVKHRLWLALIMLQDLLPLGHKQAAEIMEAALSGLVDDNPQPSVRFLQEWAV
VRTIYHSPELEKVFWKTMDDAVEQRAGSMVSFLSIIGHETRCLADCERLATFASNALPRV
IPWAMAQHFTPRLYATVILGIIWKVCESSKIDSLLERYSTTQQILRHAPDMPNTQRNLEK
LSQDFYFSVFHPLSNFTLETLCFHLPRLSHLVCEEWLPAEWFDGVKSWIPCRNTNGQLAD
CQPAEWVARAAGGAPAFTQDDSVSPAMAVRNVQKKITPWKQMLPDVNSLVVSASRKKTTT
NDLIVIASLVDRVPNLGGLCRTCEVLGVRDFVLSSLRITEEKDFVSLSVSAEKWINVLEI
KPFQLVEYVKQLKLEGYTVVGAEQTASSKPLNNFTFPKKSALILGHEKEGIPVELIQHLD
VCVEVPQEGIIRSMNVHVTGAIFIWEYARQQMELSHIR
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcgaacggacgcaaatgtcaacctctttaatgatttcattttggttatggaa
actttagaagagaaacagatgcacatcataaaccccgtgcttaccagaatgaagtcattg
gaagaccgtatgcttgtcaagaaagaatccgattcttcctggatattatgcatttacaac
cggcttttatcccacgaaaacattcaagtaatcaagtggggtttgcacaacctctgtcaa
ctaaacattgaatcctggccagggataggtcacagtgattggctttacgatgctttactt
atgggccttaataatatggtcttttacgtccgagataaagcctgtcagcttccccagttg
ggaatagatttgggacaattcttgcaaaaatgtgcaacattagaaatcgaacgcgaagga
ttttttatccggttattagggaaaatgtctctggttccttggaacgcggttggtttattc
catttggtttacgcgttcgcctctcttccacgaagcgcaattcttgatggcgaagctctt
caaatcgtgttggaatttcttcgtagcgccctgcacacgcaccaccctctgcttcgcgga
gccatacaaggattgatcttggaattcgtattgaacatgaccgtcgtgtctcaagaaaat
ctactatggatagctctcattttagcaactatcaatcctcacgaatgctacatccgcaca
acacctctctatgccactctgaaggcatggataaacgaaaattttacctcagttcagcac
gggcagttgctcgatcaacttttgtccatgcattttgaaccttctggtgatgttcgcatt
ccctattcagtggatgtcacagcggtggccagattcgccgttttgttactggatgtcgaa
accaccgatttagaaggcatgcgacaaatgcaaatacgtttggagcctcttgcagactgc
caaactcgcttgtatgctgatccgcgtacgctaaatcagcgaatgaaattaatggttacg
ctgttagatgaagttcgttcgtcaaattccactgcggttgtccgcctggtatttccattc
accgagtcggtgatacattactgcctcgaccaaatcgaatcggcagcaaattacaatagc
atttgtgaaagcctgtcggtgttgagatccattgcaaagatggacgatcttatcggagtg
atagctgcatcagggaagaaattagagatgatggcgcgtaaattacttgatggatgttct
gccttagaaaaatttaaaagcatttctatattttacctcatcgcccgattcaaccagcca
ttagtggaccaattcatccatgaaatgatttcattaaaaatgcattgccgcgctccacaa
cgtgatgattccgccttagaatatgtcacatggggcgcttttatgtcccattacttctct
gagctatggacactgatacagcaacgtctagccttcatggaacccaaattaaacccggaa
gagttgttaaatgaagcgatttgtgcaatggatatagctggtgttgaagctgtaaagtcg
atctttagctgtctgggtcatcttctgccccaagtgtgtcaatctaatcccgacctgtgc
ctctcaagccttaaagcctgttggactgtgtgctttgaatatcgccgttcggaccatttt
tgggacctgatggaacaatttgccaaaattgcctttaacaattctctaatggaaaaacct
gaaattcgcccacagcttttcggttttctctctgaattaaaaagtcaaggagaaaatatt
ctgcaacttttcaatttctcggccgaacgcattattgatatttggaccaccactgccttc
ccatcaaacgattcctataccatccagtttatcgttgatctcatttcttttggactgatt
catcgccgggatgaaatgatattttttgaaacttgtgcctttgtgcgctccctaggcgaa
cgatgccctgcaaatatccatcttcggagtgaagacatggctgacgggaaagtccgcttc
caaggtttgcgcttcctactctccctcaacaaattgaacgaacaacacatggccatggta
gaaagtctagtagaagccttgctgaaagaagataagaccatgtcagagacgaaaacgcgt
tatttttccagctcacatggacatcgcgtaaagcatcgcctatggctggcattgataatg
ttacaggatttattaccactgggccacaaacaagcagcagaaattatggaagcggctctt
tcaggactagttgatgacaatccacaacctagcgttcggtttttgcaagagtgggcggtc
gtgcgaaccatttatcactcaccagagttagaaaaggttttctggaaaacaatggacgac
gcagtagaacagagggccggttcaatggtctcctttttgtccataataggacatgaaact
cgttgcctcgctgattgtgaaagattagcaacctttgcatcaaatgccctaccacgcgtt
attccgtgggctatggctcaacattttacgccccgtctttacgctactgtcattcttgga
ataatctggaaagtctgcgaatcgtcaaaaatcgattcgttactggaaagatattcaacc
actcaacagattttgcgccatgcccctgacatgccaaatacgcaacggaatttagaaaaa
ttgagtcaagatttctattttagtgttttccatcctttaagcaattttactttggagacg
ctatgttttcacttaccaagactttcacatttggtctgcgaagagtggttacctgctgaa
tggtttgatggcgttaaaagttggattccttgtcgcaatacgaacggacaactagccgat
tgccaaccagccgaatgggtggccagagcagccggaggtgcgccagccttcactcaagat
gattccgttagtccagcaatggcagttcgaaatgttcagaaaaagataacaccgtggaag
caaatgctaccggatgtcaacagccttgtcgtatctgccagcaggaagaagactaccaca
aatgatcttattgtgattgcttcgcttgttgatcgggtcccaaatttaggaggactgtgt
cggacttgtgaagtactcggcgtaagagattttgtgttgtcctccctgcggatcactgaa
gagaaagatttcgtaagcctcagtgtttcggctgaaaaatggatcaacgtactcgaaata
aagccgtttcaactagtggaatatgtaaaacaactaaaactggaaggatatactgttgtc
ggggcagaacaaacagcgagcagcaaacccttaaataacttcacttttccaaaaaaatct
gcccttattctaggtcacgaaaaagaaggcattccagtcgaactgattcaacacctcgac
gtctgcgttgaagtgccacaagaaggaataattagatcaatgaacgtccatgtcaccgga
gccatcttcatttgggaatatgcgcgccaacaaatggagttgtcccacattcgctaa
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