Daphnia magna (water flea): 116927908
Help
Entry
116927908 CDS
T07514
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03266
Virion - Herpesvirus
dmk04145
Phagosome
dmk04512
ECM-receptor interaction
dmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116927908
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116927908
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116927908
09142 Cell motility
04820 Cytoskeleton in muscle cells
116927908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116927908
04515 Cell adhesion molecules [BR:
dmk04515
]
116927908
04090 CD molecules [BR:
dmk04090
]
116927908
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116927908
Cell adhesion molecules [BR:
dmk04515
]
Integrins
Integrin alpha subunits
116927908
CD molecules [BR:
dmk04090
]
Proteins
116927908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
116927908
NCBI-ProteinID:
XP_032790843
LinkDB
All DBs
Position
LG1:14876731..14879385
Genome browser
AA seq
650 aa
AA seq
DB search
MMVLRRIIRSFLILFLLAVPNSTVWTWNLDVREERIFRSLPKSYFGYSLNVYQPNETVTE
WLVGSPGENSFGGALYKCRSLDGEAGFGCDKVELMTRNRNAYIIPKNGWLGATVASSGGF
VLVCSPRAGPQTEGDCYSSENNLNSFSKIQLPYPRRVCLSGFSATYSPSAKTPRKPFLGG
PTCYHKDKPSTSSSLIFPALYPELDQWYLGYAMASGIFGIRQFEQGEFLLLSVAFHIASS
FTGKVYLLKKETKQELASLLGSQPGEHFGASLAVSDINGDGRDDIIVGAPHYTDYESTDL
KVEIGAVYIYYQTSNNTYEQNSSQELKGQVPGGRFGYAVAGIGDTDADGFNDVAIGAPYE
NEGFGTVYIYYGTNNGLRDRPSQVIFGNAFNPPIQTFGFAITGGDFDGNKYSDVVVGGFE
SAAVAYIPARPIAKINSKLNFVSEKINLEKTSQCSITNSSDGVTKIPVACDDISFCITYS
GLSVADQVELRVSILLDSNAEKGSRRIFFYENKQEQFTQDIIYKAGFKKCLSRKFYVTPE
IQDTASTAQARMTIELTTKIPEPNQLLPMFAGNFDKIFSNNSLVFMVSGKTSSFADATPW
WIYLVSALGAVLILSIITGVLYKLGFFKRKLPPTEQKEEDNVTQASTDGM
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatggttctccgaaggatcatccgtagttttttgattctttttttactcgcggttcca
aattccacagtttggacatggaatttggacgttcgagaggagagaatatttagaagttta
cccaaatcttattttggttatagtctgaatgtctatcagccaaatgaaacagtgacagaa
tggctagttgggtcaccgggcgaaaattcctttgggggagcgctttacaagtgcagatcg
cttgacggagaagctggattcggttgtgacaaagtggaactcatgacacgcaatcgtaat
gcctatatcataccaaaaaatggatggctcggtgctacagttgctagcagtggaggattt
gttctagtttgttcaccccgtgccggtccgcaaactgaaggggattgctactccagcgaa
aataatcttaattcgttttccaaaattcagctaccttaccctcgacgtgtttgtttgtcg
ggattttcagccacttattcgccaagcgcaaagactccccgaaagccttttctcggaggc
cctacttgctaccacaaggacaagccctcaacttcttcgagtttgatatttcccgctcta
taccccgaattagatcaatggtacttgggttacgcaatggcgtcgggcatattcggaata
cgacagtttgaacagggagaatttttgctgctatcggttgctttccatattgcttcttcc
ttcactggaaaggtgtacttactgaagaaggaaactaaacaagagttggcgagtctgcta
gggtcccagccgggtgaacactttggagcttcgctagccgtatcggatattaacggcgat
gggcgggatgacatcattgtcggcgcccctcactacacagattatgaaagtaccgatctc
aaagttgaaattggggcggtctacatttactaccaaacatcgaacaacacctatgaacaa
aatagctctcaagaactcaaagggcaagtacctggtggtagatttgggtatgctgtggca
ggtattggtgacactgatgctgatgggttcaatgacgtggcaattggagcaccatacgag
aatgaaggatttggaacggtttacatttactatggaacaaataacggccttagagatcgc
cctagtcaagttattttcggaaatgcatttaacccacctatacagacgtttggatttgcc
ataactggtggcgatttcgatggtaataaatacagcgatgtggtcgtcggtggcttcgaa
tctgctgctgtggcttacatccccgcccgtccgatagccaaaattaatagcaaactaaat
ttcgtctccgaaaaaatcaatctagaaaaaaccagtcaatgttcaatcaccaattcctct
gacggcgtaacaaagatacctgtggcatgcgacgatatcagcttctgcataacatactcc
ggtttgagcgttgcggaccaagtggagctccgcgtttccatattattagactccaacgct
gaaaagggcagtcgtcggatatttttctatgagaataagcaagaacaatttactcaagat
atcatttataaagcgggattcaagaagtgtcttagtaggaaattctatgttacacctgaa
atccaggacacagcttctactgcgcaagcgagaatgactatcgagcttactacaaaaata
ccagagcccaatcaactgttgccaatgtttgcaggaaactttgacaaaatcttttcaaac
aattcactcgtctttatggtttctggtaaaacaagctcctttgccgatgcaactccttgg
tggatttacttggtcagtgctttgggagctgttctaattctttctattattactggcgtt
ttatacaagcttggatttttcaagagaaaattaccacccaccgaacaaaaagaggaagat
aatgtgacgcaggcctcgactgacggtatgtaa
DBGET
integrated database retrieval system
