Daphnia magna (water flea): 116930001
Help
Entry
116930001 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-activated chloride channel regulator 1
KO
K05027
calcium-activated chloride channel regulator 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dmk04040
]
116930001
Ion channels [BR:
dmk04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
116930001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
Protocadherin
SARAF
Shisa
Motif
Other DBs
NCBI-GeneID:
116930001
NCBI-ProteinID:
XP_045026594
LinkDB
All DBs
Position
LG1:3755453..3761335
Genome browser
AA seq
1228 aa
AA seq
DB search
MARLRTENTYVFVPLFLVLIASPLTSTSHITLTTDGYQNVVVAIDENSGFTSCQQDLENI
KELIRNTSVSFGQGLERPAYFGDVTIILPDSWVSDPICSTLMTSTNITLLPWARSHSADI
RFTPNHPVFGNQPHSFQYGGCQEPGLSINVPSTFVSKLHXCNQRIMAREWAHYRYGVFDE
GGMPDDERHPSGYMMFQTESSDKVVRANTCSGGKTLRGEWNNEECKSTNSGNSSCEFQPD
VYNPDITSSLMYRPDLNNMEKFCTKENHDDGVPSKLSYHCGSLSSSDVIYKHPDFTSGVT
PANASAEIAFSVIQNPFSGYHVILDIASFSNKLLFDQARNSLMQFIAFLLDPVLLSIDTY
DGVNVSELQPPVYLDTTMLEPLLLTLESVNYVTGSPNDFGVALERAQTRVLDKDVLLLTA
VQTIPDLTDWITSYDENKVIVHLVHFGVSTAKVEMAQLASYGSVHVIPNVANSNLMNPYT
WAVNTLQSIYGKTRSYRAKIFEQSVIKTNSSDMIKTGYFYLDSPASKLLVSLYCLNTEQS
LDVDSVSIFQPDGYPVRNETTVNDLISTDDFYTFVVGRYQAVTLPPGMWSYEIKLDFKVT
QQIVHRLDIWAEAADSSQVQVRTWNTALDNQPLDYTKSPVGLYAQVTQDRKPVRGANVTA
YVYVTDGATSNLFTTIPLLDEGISDVTSGDGIYSAWLTTPSSTSHSYSVYYQAYGINSLA
VTDNGTYTRPPTTGSVIPMSNPIPAATQFNRYEYGPSFQLAALLSSSFDLIRPQRVTDLT
VLSYDVSSRIAELGWTAPRDNYGSGDIVTRFRLYQSIGSADSNFTEYTTPISADGSVNLT
VQVPYLSEGEYVKYRVAGKDSSNNMADPSNVVSMTGPAISTGGISNSTMWALIGVAIAIL
LIILIIVLTRWCCPVEAKRRQRQAKRKMRQWFSCGDKTAKRADTAPTTRYQSPPPTIQQW
NSPTISQDGELPAVRSDSNASTTPQPQVELRQKTADPVRTSTYGSERIYFGQEDIDRIKS
GPRSETYSERPTEIIKPRVYARPFKPNEAINRPMGNQPASRGYPYNSNKPLSMSETNLYY
TDVALRPPAAQSAKSSPSNSYLSVYAEQRADVVPPQQSAQSSLANTLRNGMRGNEEWQDS
NSFIYTDPRFDGQSKGPSSFDPQLHPANQNGLPPPLPSVPPPFPARTYNVDMGYDGDYRS
SHLSVDRNDADQQAMSRSSSKPSLVSAV
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggccaggctaagaacggagaacacgtacgtctttgttccattattcctcgttttgatt
gcctctcctctgacgtcaacgtcgcacatcacgttgaccaccgatggctaccaaaatgtg
gtggttgccatcgacgagaattccggattcaccagttgccagcaagacttggagaacatc
aaggaattgatacggaacacttccgtcagctttggtcaaggtttggaacgtccggcttac
tttggtgatgttaccattattctgcccgattcttgggtcagcgatccgatttgttccact
ttgatgacgtcgaccaatatcacactgttgccttgggccaggagccacagtgcggatatt
cgattcacgccgaatcatccggtatttggtaaccaacctcattcgttccagtacggagga
tgtcaagaacctggcttgtccatcaacgttccatcgacattcgtttccaaacttcactga
tgtaaccaaaggattatggctcgtgagtgggctcattatcgttacggtgttttcgacgag
ggtggaatgccggatgatgagcgccatccctctggctacatgatgttccagactgaaagt
tccgataaagtcgtgcgcgccaatacttgctccggaggcaaaaccctgcggggagaatgg
aataatgaggaatgcaaatcgaccaattcggggaattccagttgcgagttccaacctgat
gtttacaatccagacatcacgtcctcgttgatgtaccggccggatctgaataacatggag
aagttttgcacgaaagaaaatcacgatgatggcgtgccgagtaaattgagttaccattgt
ggcagtctcagttcttccgatgttatctacaaacacccggatttcacgtcgggagtcacg
cccgccaatgcctcggctgaaattgccttcagcgtcatccagaatccgttcagcggctat
cacgtcatccttgacattgcctctttcagcaataaactattgtttgaccaagcaaggaat
tctcttatgcaattcatcgccttcctattggatcctgtcttgctgtccatcgacacgtac
gatggtgtcaatgtcagcgaattacaaccgcccgtttacttggataccacgatgttggag
cctctgttactgacactggaaagtgttaactacgtcactggcagcccaaatgacttcggt
gttgccctcgaaagagcacaaacgcgagttttggacaaggacgtcctccttttgactgca
gtacaaactattccagatctgactgattggatcacgtcgtacgatgaaaataaagtgatt
gtccatcttgtccatttcggcgtatcgacagccaaagtggaaatggcccagttggccagc
tacggtagcgtgcacgtcataccgaacgttgccaacagcaatctgatgaatccgtacacc
tgggccgtgaacacattgcaatcaatctacggaaagactagaagctatcgtgccaaaatt
ttcgaacaatccgtcatcaagactaattcatccgatatgattaaaacgggatatttttac
ctggacagcccggcatccaagttgctcgtttcactctattgtctaaacactgaacaatca
ttggacgtcgattcagtcagcatttttcaaccggatggatatccagtgaggaatgaaact
accgtaaatgacttaatctcaacggatgatttctatacgtttgtagttggacgatatcaa
gcggtgacactgccaccgggaatgtggagctatgaaatcaaattggattttaaagtaact
cagcagatcgtgcaccgactggacatttgggctgaagcagccgattcgtctcaagtgcag
gtgcgaacctggaacaccgccctagataaccagccattagattacaccaaatcgcccgta
ggcctctacgcccaggtgacgcaagatcgaaaaccagtacggggagccaacgtcactgcc
tatgtttacgtcactgatggagcaacatccaatctatttaccacaatcccattactagac
gaaggcatttcagatgtgacatccggtgatggaatctactctgcctggttgaccactccg
tccagtacgtcacacagctattccgtctactaccaggcgtacgggatcaacagcttggct
gtcacagacaacggaacgtacaccaggccgcccacgacgggcagcgtcatcccaatgtcg
aatcccattccagctgccactcaattcaatcgttacgaatacggacccagtttccagttg
gcggctttgctatcgagcagtttcgacctgatccggcctcaacgagtcactgatctcact
gtcctctcttatgacgtgtcatccaggattgccgaattgggctggactgctccaagggat
aattacggaagcggagatattgttacgagatttagactgtatcaatccatcggttcagca
gactctaatttcacggaatacactacacccatcagcgcggacggatcagttaatttaact
gtccaagtgccttacctttccgaaggtgaatacgtcaagtatcgagttgctggtaaagat
tcttcaaacaacatggcagacccatcaaacgtcgtttcaatgaccggtcccgccatttcg
accggaggcatttcgaattccaccatgtgggctttaatcggcgtcgctatcgcaatcctt
ctcatcatcctcattatcgtcctaacacgttggtgttgtccagtcgaagctaaacggaga
caaagacaagccaaacgtaaaatgcgtcaatggttttcatgcggggacaagacggccaaa
cgggcggacactgcgccgactaccaggtaccaatcacctccgccaacgatccaacagtgg
aactcaccgaccattagccaagacggcgaattgccagcggttaggagcgatagtaacgca
tcgacgacaccccagcctcaagtggaacttcgtcagaaaacagctgatcctgtcaggact
tcgacttacggctcggaacgcatttacttcggtcaagaagacattgacaggattaaatca
ggccctcgtagcgaaacatattcagaaaggccaacggagataattaaaccacgtgtttac
gcccggccgttcaaacccaatgaagcgataaacaggccgatgggtaaccagccggccagc
aggggttacccgtacaactcgaacaagccgctttccatgtccgagacgaatttgtactac
accgatgtcgcactccgtccacctgctgcccagtcagctaaatcttctcccagcaattct
tacctgtccgtctacgctgagcagagggccgatgtagtccctccacaacaatcggcgcag
tccagcctggccaatacgctgcgcaacggaatgaggggtaacgaagaatggcaggattcc
aacagtttcatttacaccgatcctcgtttcgacggccaatccaaaggtccaagcagcttt
gatccgcaattgcatccggccaaccaaaacggacttccaccgcctttgccatccgtacca
ccgccgtttcctgctcgaacttacaatgttgatatgggttatgacggtgactaccggtcc
agccatctgtcggtcgatcgtaacgatgccgatcaacaagcgatgagcagatcgtccagc
aaaccatctttagtttcggccgtctaa
DBGET
integrated database retrieval system
