Daphnia magna (water flea): 116936464 Help Entry 116936464         CDS       T07514                                  Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism dmk  Daphnia magna (water flea) Pathway dmk03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dmk00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     116936464  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dmk03400]     116936464 DNA repair and recombination proteins [BR:dmk03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      116936464 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_II MutS_IV MUM1-like_PWWP AAA_23 Motif Other DBs NCBI-GeneID:  116936464 NCBI-ProteinID:  XP_032799494 LinkDB All DBs Position LG1:2389384..2393854 Genome browser AA seq 1303 aa AA seqDB search MSKSSQKNTLFNYFVKSPTGSTTPSRGSSALASSPSLSSPSANTTPRRTALTPSNNDTPK LKVKQGISKTLLSQKEGYELGSLVWSKLDGFPWWPSLVCLHPVKKIEKENGKIHVQFFDN PPTRSWIHMKFARPYTGSQSFESLGVGKPQDSSWHEACKEADKALNIPLEERHSLVVELL PSDEENSMSEGSTPKTSSKTSKKPEGPKPKRRRILAQVDSDDDVSDEEYKPVKIASSESE AEDSLIEEEQEEEIPEEEEETPVKRKRKLPAMNSKSVISTPSNIKSFACDSPSTISNSTK KKLSDFSCRDADGAICDSQSEDRRFSHLSYDFLKPEKIRDAQRRRPDDPEYDPRTIYVPD SFKQSLTPAMRQWWEMKINNFDVILFFKVGKFYELYHTDALIAVKELGIILMKGDHAHCG FPERGFAKYSSQLIEKGYKVARVEQTETPEMMVERCKRMSRPTKFDRVVEREVCQITSRG TRTYNAIEGDNWQVEHHFLMAVWEKSGPEGAGGKVEFGVAFVDTSIGNFQLGQFEDDRYR SRLSTLLTRYNPVEIISSKRGISADTSQVWNAACPAALHELVSSNADCWDPMKTLRSLAE SDCFKVNGDLNWPEGIKPLLDETSTLGLAAKEESELAIRALGALCWYLKECKLDQELLSR RSFQVYHPIDQEPQEDALIGSHMVLDGMTLRNLDVLVNSSMGTATGSLLERLNRCNTAFG QRMLRHWLCAPLCQQESIDDRLDAVEYLLNDASVVEKVGKILKTLPDLERLVNKIHSQGS SLKAKNHPDSRAVFFDGHIYNKKKITDFLLTLEGFRSAQKVEEYFRESTIISKLLNQSVK LKSQGGEFPDMDKELEFFRLAFDHQQAAKEGTMIPRPGVDKQYDQALERIAEVQAEAEKY LQDQKRHFGGKVTFIGTDKKRFQLEVSEAVGGRAGPSYELQGQRKGFKRYYTTESRGFLQ QMLAAEEQRNAALKDISRRIFEQFDSHHVLWENAIKCLSVLDVLLALTAFAADQKVCRPR IVSPGSHQSPFLRLVQGRHPAHSQLFANNEFIPNDVSIGSFLPSEADPPVEADHSLTLVT GPNMGGKSTLMRQVGLCVILAQMGSFVPAEEFELTPVDRLFTRLGANDHILGGESTFFVE LSETAAILKHATLHSLVLLDELGRGTATFDGTAIAYSVVDYLARRQCRTLFSTHYHSLVH DLSSHPQVRLGHMACMVENDEEVDDPSQENIIFLYQFVDGACPKSYGFHAARLAGLERNI ITRGFQQAKQMESRMLSVQLFRDMFQKQTTLPVDFQPNWNCLL NT seq 3912 nt NT seq  +upstreamnt  +downstreamnt atgtccaagtcttcacagaagaatactttatttaactactttgtgaagtcccccactggg agtacaacaccttcaaggggctcctctgctttggcgtcttctccgtccttatcaagtcct tcagcaaatacaacacctcgccgtacagctttaactccttctaataatgataccccaaaa ctaaaggttaaacaaggaatatccaaaacccttctgtctcaaaaagaaggctatgaactt ggcagtcttgtttggtcaaaacttgatggctttccttggtggcccagtcttgtttgtcta catcctgttaagaaaattgaaaaggaaaatgggaagatacatgtacagttttttgacaac ccgccaacaagatcttggattcacatgaaatttgcaagaccttacacaggaagccagagc tttgaatcacttggcgttgggaaacctcaagacagcagttggcatgaagcctgcaaagaa gctgataaagcattaaacattccactagaggaaaggcacagtctggtagttgaattactt ccatccgatgaagagaatagtatgagcgaaggatctacacccaaaacatcaagcaaaaca tctaaaaaacctgaaggtccaaaacctaaaagaaggcgtatcctggcgcaagttgacagc gatgatgacgtttcagacgaagaatacaagccagtaaaaattgctagtagtgaatcagaa gctgaggacagcctaattgaagaagagcaagaagaagaaatcccagaagaagaggaagag actcctgtgaaaaggaaacgtaaactaccagctatgaattcgaaaagcgttataagcact ccgtctaatataaaatcattcgcttgtgattctccttccaccatcagtaatagtactaaa aagaagttgtctgacttcagttgcagagatgctgatggtgcaatttgcgatagccaaagt gaagatagacgtttttctcatttgtcgtacgatttcctcaagccagagaaaattcgtgac gcacaacggcgccgtcctgatgatcccgaatacgatccaaggactatctatgtacctgat tcgttcaagcaaagcctcactccagctatgcgtcagtggtgggagatgaaaatcaataac tttgatgtcatactatttttcaaagtcggaaaattttatgagctataccatactgacgcg ctgattgctgtcaaggaattggggatcatcttgatgaaaggtgatcacgcacactgcggc tttcctgagcgaggctttgcgaaatactcctctcagttgatcgaaaaaggctacaaagtg gcccgagtcgaacagacagaaacaccagaaatgatggtcgaacgttgtaaacgcatgtct cgccccaccaaatttgaccgcgtcgtggagcgtgaggtatgtcagattacttcccgtgga actcggacgtacaacgcgattgagggagataattggcaggttgagcaccattttctgatg gcagtgtgggagaaaagtggaccagagggtgctggcggaaaagttgaatttggcgtagcg tttgtcgatacatccattgggaattttcagctgggccaattcgaagatgatcgttatcgg tcccgcctttcgacactccttactcgttacaatccagtagaaatcatttcttccaaacgc ggaatctcagcggatactagtcaagtgtggaatgccgcctgccctgccgctctccatgag ttggtcagttcgaatgccgattgctgggacccaatgaaaactctgcgctctctagccgaa agtgattgctttaaagtgaatggggatctaaactggccagaaggcattaagcctctccta gatgagacgagcacccttggtttggcggccaaggaggaatctgaactagccattcgagct ctaggtgccctttgttggtatctaaaggaatgtaaactggatcaagaacttctatcacgt cgttcttttcaagtctaccatcctattgatcaagaaccgcaagaagatgctctgattggt tcccatatggttttggatgggatgacgctacgcaatttagatgtccttgtgaactcttcc atgggtacagcaacgggatcactgctagaacgacttaaccgctgcaatacggcgtttggt caacggatgcttcgtcattggttgtgtgcacctttatgtcaacaggagtccattgacgat cgtttagatgcagtagagtatctcttgaacgatgcatctgttgtagaaaaagtgggaaag atactcaagactcttcctgatctagaacgattggtcaacaagatacacagtcaaggtagc tctttaaaagcaaagaatcatccagatagccgcgcagtcttctttgatggacatatttac aataagaaaaaaatcacggatttcttgctgacattggagggtttccgatccgcacaaaaa gtcgaggaatatttccgcgagtccaccattatttccaagctactcaaccaatcggtcaaa ctaaaaagccaaggtggggaatttccggatatggacaaagaactggaattctttcgtctc gcctttgatcaccagcaggcagctaaggaaggaacgatgattcctcgaccaggtgtcgac aagcaatatgaccaggctttggagcggattgctgaagtccaggctgaagctgagaaatac ctgcaagatcaaaagcgtcactttggcggaaaagtaactttcatcggcactgataaaaaa cggtttcagttggaagtcagtgaggcagtcggtggtcgtgcaggtccaagttatgagcta caaggccagcgcaagggattcaagcgctattacactacggaatcccgtggttttcttcaa caaatgctggcagctgaagaacaacgaaatgcggcacttaaggatataagtcgacggatt ttcgaacagtttgatagtcaccatgttttatgggagaatgccattaaatgtctttccgta ctagatgttcttctggcgctcaccgcttttgcagctgaccagaaagtttgccgtcctcga attgtttctccaggaagccaccagagcccatttctacggctagtacaagggcgccatcct gctcattcccagctatttgccaacaacgagttcattccgaatgatgtcagtataggatct tttcttccatctgaagctgaccctcctgttgaggcagatcactcccttacattggtaact ggtccaaatatgggcggtaagtcgactttgatgcggcaagttggactctgtgtcatccta gcccagatgggatctttcgtacctgccgaagaatttgagctaactccagtggaccggctc tttacgcgattgggtgccaatgaccacatcttgggaggtgaaagtaccttcttcgtcgaa ctgagtgaaacagccgcgattctcaaacatgccacacttcattcactagtcttgctggat gaactgggtcgaggcactgccacctttgatggaacagctattgcgtactctgttgtggat tacttggcgcgtcgacaatgtcgtaccttgttttccacgcattatcacagtttagttcac gacctttcatcgcatccccaagttcgtctaggccacatggcgtgtatggtggaaaatgat gaagaagttgacgatcctagccaggaaaatattatttttctctaccagtttgtggatgga gcttgtcccaagtcgtatggatttcacgctgctcgtttggctggtctggagcgaaatatt attacccgcggcttccagcaggccaaacaaatggaatcaaggatgctctctgttcagctt ttccgagatatgtttcaaaagcaaacgactttgcctgtagatttccagccgaattggaat tgccttttgtga

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