Daphnia magna (water flea): 116936546
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Entry
116936546 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116936546
Transporters [BR:
dmk02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116936546
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116936546
NCBI-ProteinID:
XP_045029921
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Position
LG1:1775027..1781454
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AA seq
675 aa
AA seq
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MLPENASASNGTVVEGGGDKLQCGNSPNSSSSSASVESLKQPDMMAKETTLSGKVSGADE
QQELILLNHHPDNDEDKAQIVFFLSETAASAGIPRPDATNDLPALEERETWAKKAEFLLA
VIGFAVDLGNVWRFPYICYKNGGGAFLIPYVVMMVFGGLPLFYMELALGQFHRSGCLTLW
RRICPALKGVGYAICIIDFYMGMYYNTIIGWAVYYFVASFTSELPWTSCDHPWNTNSCAL
VGPVDNGTFVRSPAQEYFERNVLENYLSDGLDDIGPIKWSLALCVFAVFILVYFSLWKGV
RSTGKAVWITAVAPYIVLIILLIRGASLPGAGDGIRYFLTPQWSKLAETKVWTDAASQVF
FSLGPGFGTLLALSSYNKFHNNCFYDALLTSSINLATSLLAGFVIFAVLGYMAEIRNVSI
DQLGLEGPGLVFVVYPEAIATMAGSTFWSMIFFFLLITLGLDSTFGGLEAMITGLCDEYP
VLLGRRRELFVGVLLVFIYLCALPTTTYGGMYLVDLLNVYGPGIAILFLVFVEAMGVSWC
YGTQRFSNDIESMLGFQPGPFWKITWAYVSPIFILLIFICTLVDPVPLDTQDYTYPAWSI
KVGWVLTAIPLSCIPVYMIYKFGITKGSFTQRLVKMFTPEDTSDPRNLSQISLTARDAVG
PSSVGHHSTSYGTQV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgctcccggagaacgcgagcgctagcaacgggacggtagtggagggcggcggagataag
ctccagtgcggaaatagcccaaacagttcgtcgtcttcagcatcggttgagagtctaaag
cagccggacatgatggcaaaagaaaccaccctgtccggcaaggtttccggagcggatgag
cagcaagagctcattctactaaatcatcatcccgacaacgacgaagacaaagcgcaaatc
gttttcttcctttcggagacggccgcaagtgccggaatcccccgaccggacgccaccaac
gatttgccggccctagaggaacgtgaaacctgggccaaaaaagcagaattcctcctggcc
gtcatcgggtttgcggttgatcttggcaacgtctggcgatttccttatatttgctacaaa
aacggtggaggtgcatttctcataccttatgtcgtaatgatggtgtttggtggtctgccc
ttattctatatggagcttgccctgggtcagtttcatcgcagtggctgtctcaccctctgg
agacgtatatgtcccgcacttaaaggagtgggatacgcaatttgcatcatcgacttctac
atgggcatgtactataacacaatcatcggctgggctgtctattattttgttgcctcgttc
acgtccgaattgccgtggacgtcgtgcgaccacccgtggaacaccaacagttgcgcgctg
gtcggccccgtcgacaacggcacattcgtccgcagtcccgcccaggaatattttgagcgg
aacgtattggagaattacctgtcggacggtttggatgatatcggaccaattaaatggtca
ctagcgctgtgcgtattcgccgtatttatcctcgtctacttctccctgtggaagggagtt
cgatcgactggcaaagccgtatggatcacggctgtagccccctatattgtcctgattatc
cttctcatccgcggcgcatcactgcccggagccggcgatggcatccgctacttcctcacg
ccccagtggagtaaactggctgaaacaaaggtttggactgatgcagcatcacaagttttt
ttctcactgggacctggtttcggcaccttattggccctctccagctacaacaagttccac
aacaattgcttctatgacgccttgttgacgagctccatcaatttggccaccagcttgttg
gccggctttgtcatttttgccgtactcggttatatggcagaaatcagaaacgtctcgatc
gatcaacttggcctcgaaggtccgggattggtattcgtcgtttatccagaagcaatagcc
accatggccggatcgaccttttggtcgatgatattcttcttcctgttgatcaccctagga
ttggatagcacgtttggtgggttagaagcaatgattaccggcttatgcgatgagtaccca
gttctgctgggccggcggcgggaattatttgttggagtgttgctcgttttcatctacctc
tgcgctctcccgaccaccacctatggcggaatgtatttggtggatttattgaacgtctac
ggcccaggcattgccatccttttcttggtgtttgtggaagcaatgggtgtgagttggtgt
tatggtacgcagagattctccaacgatatcgaatccatgctgggctttcaacctggaccc
ttttggaagatcacttgggcttatgtcagccccatctttattttgttaattttcatctgt
actttggtcgatccggtcccactggatacgcaagattacacttatcctgcctggtccatc
aaagtcggttgggtactcacagccattccgctgtcttgcatccctgtctacatgatctac
aaatttggcattacgaaaggatcttttacgcagcgactggtgaaaatgtttacaccggaa
gacacgagtgatcctcggaatttgtcgcaaatatctttgacggctcgtgatgccgtggga
cccagcagtgtcggccaccactccacctcctacggcactcaagtctga
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