Desulfonema magnum: dnm_079780
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Entry
dnm_079780 CDS
T07102
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
dmm
Desulfonema magnum
Pathway
dmm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dmm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
dnm_079780 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dmm01007
]
dnm_079780 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmm03016
]
dnm_079780 (lysS)
Enzymes [BR:
dmm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
dnm_079780 (lysS)
Amino acid related enzymes [BR:
dmm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
dnm_079780 (lysS)
Transfer RNA biogenesis [BR:
dmm03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
dnm_079780 (lysS)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
tRNA-synt_1g
DUF6709
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QTA91905
UniProt:
A0A975GSC0
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Position
6390113..6391693
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AA seq
526 aa
AA seq
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MKTDIRKKKLWPYGEANKVLKRHDYNTDHIYTFETGFGPSGFPHIGTFGEIVRTEFIING
LKDAGFKTKLIAFSDDLDGLRKVPEGMPEWLKEHLGKPVSAIPDPYGECSSFSEHMNSKL
RKLLEWMGIEYQFKTSKECYENGDFDEAIKILLSNYKMLEKIIAPTLSKETLENWYPFFP
LCEKCGSVLTTVVKEVNLEDYTVRYACTKTHGEVQGCGYEGWQTALGGHGKMTWRVDWPM
RWYALGVDYELYGKDLIESFKIGKRIMNQIFRTKEPENMFYEMFLDENGAKISKSKGKGL
TVEEWLKYGTIESLYLLMYRRPRKAKELSFNIIPSYVDDVTSLSANYHSNSHPEEHDFNF
ITRFQGKEKTFPGISYMLICNLMTALKSDDKKLIKNYLSKQKELTEEDIESDFLNDMIEK
ASRYYHDFVTAKKPEFELSNEDIFLMGQFVGLLYTELTSEEIHNAVYTIARDNGRNPRDF
FKIIYLVFIGQDRGPRVGTFVKMIGQEKTIEIVSNAIKSFLSAESV
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggacataagaaaaaaaaaactatggccttatggcgaggcaaataaagtatta
aaacggcatgactataataccgatcatatttatacatttgagaccggcttcggaccttcg
ggatttccccatatcggaacatttggcgagattgtaagaaccgaatttattattaatggt
ctgaaggacgcgggatttaaaacaaaactgattgctttttcagatgatctggatgggctg
cgcaaggttcccgaaggtatgccggaatggctaaaagagcatcttggaaaacccgtgtcc
gcaattcctgatccctacggagaatgctcgtccttttccgagcatatgaacagcaaactc
agaaaactgcttgaatggatgggcattgagtaccagtttaagacatcaaaagagtgttat
gaaaacggcgattttgacgaggccatcaaaatattgttaagcaattacaagatgcttgaa
aaaatcatcgctcccacgctgtccaaggaaacattggaaaactggtatccgttttttcct
ttatgcgagaaatgcggaagtgttttaaccaccgttgtaaaagaagtaaatttggaagac
tacacggtccgatatgcatgtacaaaaacacatggggaagttcagggatgcggatatgaa
ggctggcaaaccgcgctcgggggtcacggaaaaatgacctggcgcgtggactggcccatg
cggtggtacgctttgggcgttgattatgagctgtatggcaaagaccttattgagtccttt
aagattggcaaacggattatgaatcagatattccggacaaaagagccggaaaacatgttt
tatgaaatgtttctggatgaaaacggcgcaaagatttcaaaatcaaaaggcaaggggctt
actgttgaggaatggctgaaatatggcacaattgaatcgctttacctgctgatgtaccgg
cggccccggaaggccaaagaattatcatttaacatcattccttcttatgtggatgatgtg
acatcgctttccgcaaattatcacagcaattctcatccggaagagcatgattttaatttc
atcacacgctttcagggaaaagaaaaaacattcccgggcatcagttatatgctgatatgc
aacctgatgaccgcgctgaaatccgatgacaagaaactgataaagaactatctctccaaa
caaaaggaactcacggaggaggatatcgaaagtgattttctgaatgatatgattgagaaa
gcttcgagatactatcatgattttgtcaccgcgaaaaagcccgaatttgagctttccaat
gaagatatttttcttatgggtcagtttgtgggactgctttacacagaattaacctctgag
gaaattcacaacgcagtttacaccattgcgcgagacaacggcagaaacccccgggatttt
tttaaaatcatatatcttgtttttatcggacaggacagaggcccgagagtgggaacattt
gtcaaaatgatcggtcaggaaaagaccattgaaatagtaagcaacgcgataaaatccttt
ttgtcggccgaatcagtctga
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