Drosophila miranda: 108159472
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Entry
108159472 CDS
T06132
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dmn
Drosophila miranda
Pathway
dmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108159472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108159472
Enzymes [BR:
dmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
108159472
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
108159472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_22
CbiA
AAA_16
nSTAND3
ATP_bind_1
TniB
Motif
Other DBs
NCBI-GeneID:
108159472
NCBI-ProteinID:
XP_017148284
LinkDB
All DBs
Position
3:7150552..7152277
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AA seq
425 aa
AA seq
DB search
MSDHQSRGQDFSLEADSELRFEIEQKDAKVLVTLVNGFAELFGTELVKKKKYEFGMGAKV
AIFTYQGCVLHVTGKMDVCYISKETPMVQYVNCHAALEQFRTEAEEKDRSGPVAMVVGPT
DVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATTFIERPASVEEGFPKTAP
LVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNGNKRTKSSGIIVNTCGWVKGHGYAHLL
HAARAYGACAIFVLDQERLYNELLRDVPSSVHVVLLPKSGGVVERSKELRHECRDQRIKE
YFYGNARAPFYPFSFEVKFQELRLYKIGAPSLPDSCMPIGMKAEDNKTKVVAVTPTPALI
HHVLALSFAESVDDDVIGKNIAGFCCVTDVDMERQAVMLLSPQPRPLPPNALLLWSELQF
MDNHT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcatcaaagcagaggtcaggacttcagcctggaggcagactccgagctgcgt
tttgaaatagagcagaaggacgccaaagtgttggttacactagtcaatggatttgcggag
ctctttggcaccgagttggttaagaaaaagaaatatgagtttgggatgggggccaaggtg
gcgatcttcacataccaaggatgcgttcttcatgtcactggcaaaatggacgtttgctac
atatccaaggagactccgatggtccagtacgtcaattgtcacgcggcacttgaacagttt
cgcacggaggccgaggagaaggatagaagtggtccggtggccatggtggtgggacccacg
gacgtcggcaagagcacgctctgccggattctcctgaactatgcagtcagggtcgggcgc
cggcctctctacgcggacctcgatgtgggccagggagcaatcgccatatccggcaatgtg
gccaccacattcatcgaaaggccagccagtgtcgaggaaggttttcccaagaccgccccg
ctcgtctaccacttcggacacaagtcacccagcggcaacagtgtcctctacaacgcagtg
gtctccaagatggccgaggtcacgctgcagtcgctcaacggaaacaagcgcacaaagagc
tccggcatcatagtcaacacctgcggctgggtcaagggccatgggtatgcgcatttgctt
catgcagccagggcctatggtgcttgcgccattttcgtattggatcaggagcgactgtac
aacgaactgttgcgggatgtgccctcaagcgttcatgtggtcctgttgcccaagagtggc
ggtgttgtggagcgcagcaaggagctgagacacgagtgccgggatcagcgcatcaaggaa
tacttctatggcaatgcccgtgcacccttctatccgttttcctttgaggtgaaattccag
gagctgcgattgtacaaaattggcgccccttcgctgccagactcctgcatgcccatcggc
atgaaggccgaggacaacaagacaaaagtggtggctgtaacgccaaccccggcactgatc
catcacgtgttggccctgtcttttgcagagtccgtggacgatgatgtgattggcaagaat
attgcaggcttctgttgcgttaccgacgtggatatggaaaggcaagctgttatgctcctc
tcgccgcaaccacgaccgctgccgccgaacgctctgctgctgtggtcggagctgcaattc
atggacaaccatacctag
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