Drosophila miranda: 117186162
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Entry
117186162 CDS
T06132
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
dmn
Drosophila miranda
Pathway
dmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117186162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
117186162
Enzymes [BR:
dmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117186162
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117186162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zf-RING_7
zf-tcix
Motif
Other DBs
NCBI-GeneID:
117186162
NCBI-ProteinID:
XP_033242276
LinkDB
All DBs
Position
XR:complement(43041847..43119277)
Genome browser
AA seq
1381 aa
AA seq
DB search
MPKEQFRASALNKKISHVQFGISGADEIQQEALVRITSKNLYQGQRQPVPSGVLDRRMGI
STKDAVCETCGHGLNECIGHFGYLDLALPVFHIGHFRATINILQMICKSCAQVMLKFEDR
LSFEKKLHNPNFSYLGKKALHAQMLAKAKKVTKCPHCGTANGGVKKGPGLLKILHDPYKG
RKVDAVFTSNMDEMLRSTEFNRDLNLTLSNYSTAEELTPLMVLDLFEQIPQSDVALLGMC
SRGAHPKHLIVTRVFVPPACIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQRHMATGG
KIELIYEDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRV
DFSGRTVISPDPNLMINQVGVPVRVAKILTYPERVNLANIRHMKHLVRNGPGTHPGANYV
QQRGSSFKKYLAYGNREKVAQELKCGDIVERHLCDNDIVLFNRQPSLHKMSIMCHRAKVQ
PQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALILMGNQSNLVTPKNGEILIAA
TQDFITGGYLLTQKEVFLTKEEAMQLAACFLDNEDSTMNIQIPAPALLKPRRLWTGKQIF
SLLMRPNSDSHIRLNMVNKGRNYTKNMDLCINDSWIHIRNSELMCGVMDKATMGSGTKQC
IFYLLLRDFGEAHATKAMWRLARITSYFIQNLGFSFGISDVTPSQKLLHHKEILLERGYA
KCNDYIEHLKSGTLQCQPGCTPKETLESVMLRELSGIREQAAKTCFAELHPTNSALIMAL
SGSKGSNINISQMIACVGQQAISGKRVPNGFENRALPHFDRHSAIPAARGFVQNSFYSGL
TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGTVRNAVSEMVDTIY
GGDGLDPVSMETRNKPVDLIHQYNNLRAQIPHRVQNALPAAEIPVVLESLLQNSEFTDAR
ADFKMDIMKHLSTVSKRIGQVQQQYREYGNLCHQIECITAEQLLEFVRRINDRYNRAVSE
PGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAE
LQENSSMEYARHVKSRIEKTTLGELSSFVEVVCGPYSCHLAMGIDMSRIKVLGLHINLET
IVACILKSRMRLKPAQVEIAARTSRIIVRVESSRTSTINAELARLALSLQNVVVAGLPNI
ARAVIAVDDTRQPAIYKLCIEGYGLREVISTYGVVGERTRSNNICEIFQTLGIEAARTII
MSEITEVMEGHGMSVDWRHIMLLASQMTARGEVLGITRHGLAKMRESVFNLASFEKTADH
LFDAAYYGQTDTINGVSERIILGMPAGIGTGIFKLLHHHEDKQIPSIGQTICIGLNLLPF
T
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggaacagtttcgtgcatcggctctgaacaaaaaaatttcacatgtacagttt
ggaatcagtggggccgatgagattcagcaggaagcgctggtaaggatcacctcaaaaaat
ctctatcagggacaacgacaaccggtgccttctggcgtactggatcgtagaatgggcatc
agcacgaaagatgctgtatgtgaaacgtgcggtcatggtttgaatgagtgcatcgggcac
tttggctatttagacttagcgctcccagtcttccacataggccacttccgtgccacaatt
aatattctacagatgatatgcaagtcgtgtgctcaggtgatgctaaagtttgaggaccgt
ctttcatttgaaaaaaagctacataatccaaatttctcatatctgggaaaaaaggccttg
catgcacagatgttggccaaggccaagaaagtcacaaaatgcccacactgcggaaccgcc
aacggaggcgtgaagaagggtcctgggcttctgaagattctgcatgatccatacaaaggg
cgcaaggtagatgctgtgtttacaagcaacatggatgaaatgcttcgctcgacagagttc
aatcgcgaccttaatcttacactcagtaattacagcacggctgaggagctcactccacta
atggtgctggacctttttgaacagatcccacagagtgatgtagccttattgggaatgtgc
tctcgtggtgcccatccaaagcatctaattgtgacgcgtgtatttgtgcctcctgcctgc
attcgtccatcggtattatcagaagtaaaggccggcacaacagaagatgacttgactatg
aaacagagcgagatcttactaattaatgatgtgatccaacggcacatggctaccggcgga
aaaatagaacttatatatgaagactgggactttttacaactgcatgtggccctttacttt
catagcgagatcagtggaattccgatcaacatggcaccgaagaaaactacacgaggcatt
gttcagcgtttgaagggaaaacagggacgattccgatgcaacctatctggaaaacgtgta
gacttcagcggccgtaccgtcatttcgccggaccccaacttgatgattaatcaggttggg
gtgccagtgcgtgttgctaagattcttacctacccggaacgagtaaatctcgcaaacatt
cgtcatatgaagcatcttgtacgcaatggacctggcacgcacccaggggccaactacgtc
caacagcggggttctagtttcaaaaagtacctcgcatatggcaatcgtgagaaggttgca
caggagcttaaatgtggggatattgtggagaggcatctttgcgataatgatatcgttcta
tttaatcgccaaccttcgctccacaagatgtccattatgtgtcatcgcgccaaagtacaa
ccccaacggacgtttcgttttaatgagtgcgcctgtacaccatacaacgccgacttcgac
ggtgatgagatgaatcttcacttgccacagactgaggaggccagagccgaggcattaatc
cttatgggtaatcagtcaaacttggttacgccaaaaaatggcgagattttgattgctgcc
acgcaggactttataactggtggatacctgcttacacaaaaagaggtttttcttaccaag
gaagaggcgatgcagttagctgcctgctttttagacaatgaagactcgaccatgaacatt
cagataccagcacctgctcttcttaagccgcgccgactctggactggaaaacaaatattc
agcttgctaatgcgcccaaacagcgactcccatattcgtctcaatatggtgaacaagggc
cgaaactatacaaaaaacatggatctatgtatcaacgactcttggattcacatccggaat
tctgagctaatgtgtggtgtaatggataaggccacaatgggctcgggtacaaagcaatgt
atcttttatttactgctgagggactttggtgaagcgcacgctaccaaagcaatgtggcga
ttggccaggatcacctcttactttatacagaaccttgggttctccttcggcataagtgac
gtgacgcctagccaaaaacttctacaccacaaggagatattgttggagcgcggctacgca
aagtgcaatgactatattgaacatctcaagtcgggaacactacagtgccaacctggatgt
acacccaaggagaccttggaatcggtgatgttgcgtgagctctcaggcattcgcgagcaa
gcagctaaaacttgtttcgccgagctgcaccccaccaatagcgctcttataatggctctg
agtggctctaaaggctcaaacatcaacatatctcaaatgatcgcctgcgtaggacagcaa
gctattagtggtaaacgagttcccaacggcttcgagaatcgtgctttgccccactttgac
aggcactctgctatacccgcggctaggggctttgttcagaacagcttctattctggccta
acacccacggaatttttttttcataccatggccggacgcgaaggtttggttgacacggcg
gtgaagactgcggagacaggatatctgcagagacgtttggtcaagtgccttgaggatctg
gttgtgcactacgatggcactgttcgcaacgctgtaagcgagatggtagataccatctac
ggtggtgatggacttgaccctgtttcaatggaaactcgaaacaagccagtcgatctgatt
catcaatacaacaatctacgggcccaaataccacatcgcgtgcaaaacgctcttccggcc
gccgagattccggtcgtcttagaatcgcttttgcaaaattccgagtttactgacgctcgc
gccgattttaagatggatatcatgaagcatctaagtactgtgtctaagcgtattggacaa
gttcaacaacagtatagagaatatggcaatctatgtcatcagatcgaatgtatcactgcc
gaacagctgctagaatttgtacgtcgtatcaatgatcgatataatcgcgccgtaagcgaa
cccggtacagcagtaggagctattgctgctcagagcattggagagccgggcacccaaatg
acgctaaaaacttttcattttgcgggtgtagcttcgatgaacattactcagggtgtgcct
cgtattgtggagataatcaatgcaacgaaaaccatttcaacgccaataataactgctgag
cttcaagaaaacagtagcatggaatatgcgaggcatgtgaagtctcgcattgagaaaacc
acgttgggcgagctgtcttcctttgtcgaggtcgtatgtggaccttatagttgtcactta
gccatgggaattgacatgtcgcgcattaaagtgctaggacttcacatcaacctagagaca
attgtggcttgtatacttaagtctcgaatgcgacttaaacctgcacaagtggagattgcc
gcccggacatcgcgaattattgttcgtgttgaatcctcgcgaacctctacaataaacgct
gagttagcgcgactggcactcagtctccagaacgttgtcgttgcgggtttgccgaacatt
gcgcgtgccgtcattgcagtagatgatactcgacaaccggccatatataaactttgtatt
gaagggtatgggcttcgcgaggtcatttctacttacggcgtagtcggcgaacgcactcgc
agtaacaatatctgtgaaatattccagacactgggcattgaagcagctcggaccattatc
atgagcgagatcactgaagttatggagggacatggtatgagtgtcgactggcggcacatt
atgcttttagccagccaaatgacagcccgcggtgaggtattgggcatcacgcgacacggc
cttgctaaaatgcgagagagcgtttttaatttggcatcgtttgagaagactgcagatcac
ttgtttgatgcagcgtattacggccaaacggacactattaatggcgtatcggagcgcatt
atacttggtatgccggcaggcataggtacaggtatctttaagctgctacatcatcacgaa
gacaagcaaattccgagtattggccaaacaatttgcattggtttgaatcttctaccgttc
acgtag
DBGET
integrated database retrieval system
