Drosophila miranda: 117188106
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Entry
117188106 CDS
T06132
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dmn
Drosophila miranda
Pathway
dmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117188106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117188106
Enzymes [BR:
dmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
117188106
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
117188106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_22
CbiA
AAA_16
nSTAND3
ATP_bind_1
TniB
Motif
Other DBs
NCBI-GeneID:
117188106
NCBI-ProteinID:
XP_033247335
LinkDB
All DBs
Position
3:7161175..7162939
Genome browser
AA seq
425 aa
AA seq
DB search
MSDHQSRGQDFSLEADSELRFEIEQKDAKVLVTLVNGFAELFGTELVKKKKYEFGMGAKV
AIFTYQGCVLHVTGKIDVCYISKETPMVQYVNCHAALEQFRTEAEEKDRSGPVAMVVGPT
DVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATTFIERPASVEEGFPKTAP
LVYRFGHKSPSGNSVLYNAVVSKMAEVTLQSLNGNKRTKSSGIIVNTCGWVKGHGYAHLL
HAARAYGACAIFVLDQERLYNELLRDVPSSVHVVLLPKSGGVVERSKELRHECRDQRIKE
YFYGNARAPFYPFSFEVKFQELRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALI
HHVLALSFAESVDDDVIGKNIAGFCCVTDVDMERQAVMLLSPQPRPLPPNALLLWSELQF
MDNHT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcatcaaagcagaggtcaggacttcagcctggaggcagactccgagctgcgt
tttgaaatagagcagaaggacgccaaagtgttggttacactagtcaatggatttgcggag
ctctttggcaccgagttggttaagaaaaagaaatatgagtttgggatgggggccaaggtg
gcgatcttcacataccaaggatgcgttcttcatgtcactggcaaaatagacgtttgctac
atatccaaggagactccgatggtccagtacgtcaattgtcacgcggcacttgaacagttt
cgcacggaggccgaggagaaggatagaagtggtccggtggccatggtggtgggacccacg
gacgtcggcaagagcacgctctgccggattctcctgaactatgcagtcagggtcgggcgc
cggcctctctacgcggacctcgatgtgggccagggagcaatcgccatatccggcaatgtg
gccaccacattcatcgaaaggccagccagtgtcgaggaaggttttcccaagaccgccccg
ctcgtctaccgcttcggacacaagtcacccagcggcaacagtgtcctctacaacgcagtg
gtctccaagatggccgaggtcacgctgcagtcgctcaacggaaacaagcgcacaaagagc
tccggcatcatagtcaacacctgcggctgggtcaagggccatgggtatgcgcatttgctt
catgcagccagggcctatggtgcttgcgccattttcgtattggatcaggagcgactgtac
aacgaactgttgcgggatgtgccctcaagcgttcatgtggtcctgttgcccaagagtggc
ggtgttgtggagcgcagcaaggagctgagacacgagtgccgggatcagcgcatcaaggaa
tacttctatggcaatgcccgtgcacccttctatccgttttcctttgaggtgaaattccag
gagctgcgattgtacaaaattggcgcccctccgctgccagactcctgcatgcccatcggc
atgaaggccgaggacaacaagacaaaagtggtggctgtaacgccaaccccggcactgatc
catcacgtgttggccctgtcttttgcagagtccgtggacgatgatgtgattggcaagaat
attgcaggcttctgttgcgttaccgacgtggatatggaaaggcaagctgttatgctcctc
tcgccgcaaccacgaccgctgccgccgaacgctctgctgctgtggtcggagctgcaattc
atggacaaccatacctag
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