KEGG   Drosophila miranda: 117188106
Entry
117188106         CDS       T06132                                 
Name
(RefSeq) protein CLP1 homolog isoform X1
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
dmn  Drosophila miranda
Pathway
dmn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117188106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmn03019]
    117188106
Enzymes [BR:dmn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     117188106
Messenger RNA biogenesis [BR:dmn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     117188106
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N MMR_HSR1 AAA_22 CbiA AAA_16 nSTAND3 ATP_bind_1 TniB
Other DBs
NCBI-GeneID: 117188106
NCBI-ProteinID: XP_033247335
LinkDB
Position
3:7161175..7162939
AA seq 425 aa
MSDHQSRGQDFSLEADSELRFEIEQKDAKVLVTLVNGFAELFGTELVKKKKYEFGMGAKV
AIFTYQGCVLHVTGKIDVCYISKETPMVQYVNCHAALEQFRTEAEEKDRSGPVAMVVGPT
DVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATTFIERPASVEEGFPKTAP
LVYRFGHKSPSGNSVLYNAVVSKMAEVTLQSLNGNKRTKSSGIIVNTCGWVKGHGYAHLL
HAARAYGACAIFVLDQERLYNELLRDVPSSVHVVLLPKSGGVVERSKELRHECRDQRIKE
YFYGNARAPFYPFSFEVKFQELRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALI
HHVLALSFAESVDDDVIGKNIAGFCCVTDVDMERQAVMLLSPQPRPLPPNALLLWSELQF
MDNHT
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtcggatcatcaaagcagaggtcaggacttcagcctggaggcagactccgagctgcgt
tttgaaatagagcagaaggacgccaaagtgttggttacactagtcaatggatttgcggag
ctctttggcaccgagttggttaagaaaaagaaatatgagtttgggatgggggccaaggtg
gcgatcttcacataccaaggatgcgttcttcatgtcactggcaaaatagacgtttgctac
atatccaaggagactccgatggtccagtacgtcaattgtcacgcggcacttgaacagttt
cgcacggaggccgaggagaaggatagaagtggtccggtggccatggtggtgggacccacg
gacgtcggcaagagcacgctctgccggattctcctgaactatgcagtcagggtcgggcgc
cggcctctctacgcggacctcgatgtgggccagggagcaatcgccatatccggcaatgtg
gccaccacattcatcgaaaggccagccagtgtcgaggaaggttttcccaagaccgccccg
ctcgtctaccgcttcggacacaagtcacccagcggcaacagtgtcctctacaacgcagtg
gtctccaagatggccgaggtcacgctgcagtcgctcaacggaaacaagcgcacaaagagc
tccggcatcatagtcaacacctgcggctgggtcaagggccatgggtatgcgcatttgctt
catgcagccagggcctatggtgcttgcgccattttcgtattggatcaggagcgactgtac
aacgaactgttgcgggatgtgccctcaagcgttcatgtggtcctgttgcccaagagtggc
ggtgttgtggagcgcagcaaggagctgagacacgagtgccgggatcagcgcatcaaggaa
tacttctatggcaatgcccgtgcacccttctatccgttttcctttgaggtgaaattccag
gagctgcgattgtacaaaattggcgcccctccgctgccagactcctgcatgcccatcggc
atgaaggccgaggacaacaagacaaaagtggtggctgtaacgccaaccccggcactgatc
catcacgtgttggccctgtcttttgcagagtccgtggacgatgatgtgattggcaagaat
attgcaggcttctgttgcgttaccgacgtggatatggaaaggcaagctgttatgctcctc
tcgccgcaaccacgaccgctgccgccgaacgctctgctgctgtggtcggagctgcaattc
atggacaaccatacctag

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