Dermacoccus nishinomiyaensis: HX89_12185
Help
Entry
HX89_12185 CDS
T03223
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
dni
Dermacoccus nishinomiyaensis
Pathway
dni00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HX89_12185
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dni01007
]
HX89_12185
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dni03016
]
HX89_12185
Enzymes [BR:
dni01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HX89_12185
Amino acid related enzymes [BR:
dni01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HX89_12185
Transfer RNA biogenesis [BR:
dni03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HX89_12185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
NDUF_B4
CT47
Motif
Other DBs
NCBI-ProteinID:
AIF41565
UniProt:
A0A075JI98
LinkDB
All DBs
Position
complement(2606557..2608371)
Genome browser
AA seq
604 aa
AA seq
DB search
MTTVLPPDADWVSRLADETIAEAEKRGTKVVVASGISPSGPVHLGNLREVMTPHLVADEI
RRRGIECEHIISWDDFDRYRKVPNVEGVDASYEQYIGMPLTRVPAPKGSSASSWAEHFRA
QFEEGLAALGVVYRGISQSEQYGAGAYTDQILFAMSKRDELDAILARYRTLPKPDGDAAG
SGKPVKGGKKAPVLSEEEQAAAAEAEAGSGAAAEDDGGSASGYYPYKPYCSACGTDFTTV
TAYDDATHDLTYTCRCGHTETVDLREHRNGKLVWKIDWPMRWSVEKVVFEPSGVDHQSPG
SSFVVGKDVAPIFGWERPLGPMYAFVGIKGMAKMSSSKGGVPTPKDALGIMEPALLRWLY
ARKKPNQSFTVAFDSDVQRMYDEWDALVAKVAADKGQPGDVAAYVRASTTAEKVLPATEY
PVAYRTLASISDITTGDETQTLRIVGTLDPANPPSSLDALRPRLTNVENWVARYMPDDER
TVVRETKNADALAAASDEQKTALRILLDGLDVPGEQGLPRIEDAWSLDGLTTQVYGVPKV
QIGKGADFRPDRKADPETAAALGASQREFFKLLYTLLIDKETGPRLPTLLLAVGPQRLRE
LVTP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgtgctgcctcctgacgccgactgggtttcgcgacttgccgacgagacgatc
gccgaagccgagaagcgtggcacgaaggtcgttgtcgcctccggcatcagcccctcgggc
ccggtgcacctgggcaacctgcgcgaggtcatgacgccgcacctcgtcgccgacgagatc
cgtcgccgcggcatcgagtgtgagcacatcatcagctgggacgacttcgaccgctaccgc
aaggtgccgaacgtcgagggcgtcgacgcctcgtacgagcagtacatcggcatgccgctg
acgcgcgtgcccgcgccgaagggcagttcggcgagcagctgggccgagcacttccgcgcc
cagttcgaggagggcctcgccgcgctcggagtcgtctaccgaggcatcagccagagcgaa
cagtacggcgcgggcgcctacacggatcagatcctcttcgcgatgagcaagcgcgacgaa
ctcgacgccatcctcgcgcgctaccgcaccctgccgaagcctgacggcgacgccgccggc
agcggcaagcccgtcaagggcggcaagaaggcgcccgtgttgtccgaggaggagcaggcg
gcagccgccgaggcggaggccggttccggggcagcagccgaggacgacggcggcagcgcg
tccggttactacccgtacaagccgtactgctcggcgtgcggcaccgacttcaccaccgtc
accgcctatgacgacgccacgcacgacctcacgtacacgtgccgctgcgggcacaccgag
accgtcgacctgcgtgagcaccgcaacggcaagctcgtgtggaagatcgactggccgatg
cgctggtcggtcgagaaggtcgtcttcgagccgtcgggcgtcgatcaccagagccccggt
tcgagcttcgtcgtcggcaaggacgtcgctccgatcttcgggtgggagcgcccgctcggc
ccgatgtacgcgttcgtcggcatcaagggcatggcgaagatgagctcgagcaagggtggc
gtgccgaccccgaaggacgcgctcggcatcatggaaccggccctgctgcgctggctttac
gcgcgcaagaagccgaaccagagcttcaccgtcgcgttcgactccgacgtgcagcgcatg
tacgacgagtgggacgcgctcgtcgcgaaggtcgccgccgacaagggccagccgggcgac
gtcgccgcctacgtgcgcgcgtcgacgacggctgagaaggtgctgcccgcgaccgagtac
ccggtcgcctaccgcaccctcgcgagcatcagcgacatcacgacgggtgacgagacgcag
acgctgcgcattgtcggcacgctcgacccggcgaaccccccgtcgagcctcgacgcgctg
cgcccgcgcctgacgaacgtcgagaactgggtcgcgcgctacatgcccgacgacgaacgc
acggtcgtgcgggagacgaagaacgccgacgccctcgcagccgccagcgacgagcagaag
accgccctgcgcatcctgctcgacggcctcgacgtaccgggcgagcaggggctgccgcgc
atcgaggacgcgtggtcgctcgacgggctgacgacgcaggtctacggtgtgccgaaggtg
cagatcggcaagggtgccgacttccgacccgaccgcaaggccgacccggagacggccgca
gccctcggcgcgagccagcgcgagttcttcaagctgctctacacactgctcatcgacaag
gagaccggcccgcgtcttccgacgctgctgctcgccgtcggcccgcagcgcctgcgcgaa
ctcgtcaccccctga
DBGET
integrated database retrieval system
