Drosophila navojoa: 108653838
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Entry
108653838 CDS
T05898
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dnv
Drosophila navojoa
Pathway
dnv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108653838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108653838
Enzymes [BR:
dnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
108653838
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
108653838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_16
AAA_18
AAA_22
nSTAND3
ATP_bind_1
CbiA
GTP_EFTU
TniB
Motif
Other DBs
NCBI-GeneID:
108653838
NCBI-ProteinID:
XP_017960180
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MSEDNNNGREYILDADSELRFEIEQKEAKVFLTLISGLAELFGTELVKKKKYEFGIGAKV
AIFTYQGCVLQVTGKMDVCYISKETPMIQYINCHAALEQFRIDAEEHDKRGPVILVVGPM
DVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAISIPGNIATVLIERPASVEEGFAKTAP
LVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLDANKRTKSSGIIVNTCGWVKGYGYKHLL
HAARAYRARAIFVLNQERLYNDLLRDVPSNVHVVLLPKSGGVVERTKELRHESREQRIKE
YFYGNIRTPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKKKVVPVTPTPSLL
HHILTLSFAESTDENVIGTNVAGFCCVTEVDMERQSVMLLSPQPRPLPPNALLLWSEVQF
MDNHA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagataataataatggtagagaatatatattggatgcagactctgagctgcga
ttcgaaatcgagcaaaaagaggctaaagtgtttttgacgctcatctctgggcttgcagag
ctctttggcactgaattggtaaagaaaaagaaatatgaattcggaataggggcaaaagtg
gcgatatttacctaccaaggctgcgttctgcaagtaacgggcaaaatggatgtctgttat
atctctaaagagacaccgatgatacaatatataaactgtcatgcagcattggagcagttt
cgtattgatgccgaagaacatgataaacggggcccagttattctagtagtagggcccatg
gacgtgggaaagagtaccctctgtcgtattctgttgaactatgcagtgcgagtaggccga
agaccgctttatgcagatctcgatgtgggccaaggtgctatttcaatccctggcaatata
gctactgttctcattgaacgaccagccagtgtcgaggaaggatttgcgaaaacagcacct
ttagtttaccactttggtcacaaatctcctagtggcaacagcgtgctctataatgctgta
gtatcaaaaatggcggaagtgacactgcaatcgttagacgccaataaacgaaccaaaagc
tcaggcatcattgtcaacacgtgtggttgggttaagggctatggctacaagcacttgctg
catgcagcccgagcttatcgcgctcgtgccatttttgtattaaaccaggagcgtctgtac
aatgacctgttgcgggatgtaccgagcaatgttcatgttgtcctcttgccaaaaagtggc
ggcgtggtagagagaactaaagaattacggcatgaatcgcgcgagcaacgcataaaggaa
tatttttatggcaatatacgtacgcctttttatccattttcgtttgaagtcaaatttcaa
gatctacgtctttacaaaattggtgctcccccgttgcctgattcatgtatgcccattggt
atgaaggcggaagataacaaaaaaaaagttgtaccggttacgccgacgccatctctacta
catcacattctcacgttaagctttgcagagtctacggatgaaaatgtcattggcactaat
gttgctgggttttgttgcgttactgaagtggacatggagcgacaatctgtaatgctgctg
tcaccacagccacgtcctttgccgccgaatgcgttgttattgtggtctgaagtacagttt
atggacaatcatgcctaa
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