KEGG   Drosophila navojoa: 108653838
Entry
108653838         CDS       T05898                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
dnv  Drosophila navojoa
Pathway
dnv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dnv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108653838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dnv03019]
    108653838
Enzymes [BR:dnv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     108653838
Messenger RNA biogenesis [BR:dnv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     108653838
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N MMR_HSR1 AAA_16 AAA_18 AAA_22 nSTAND3 ATP_bind_1 CbiA GTP_EFTU TniB
Other DBs
NCBI-GeneID: 108653838
NCBI-ProteinID: XP_017960180
LinkDB
Position
Unknown
AA seq 425 aa
MSEDNNNGREYILDADSELRFEIEQKEAKVFLTLISGLAELFGTELVKKKKYEFGIGAKV
AIFTYQGCVLQVTGKMDVCYISKETPMIQYINCHAALEQFRIDAEEHDKRGPVILVVGPM
DVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAISIPGNIATVLIERPASVEEGFAKTAP
LVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLDANKRTKSSGIIVNTCGWVKGYGYKHLL
HAARAYRARAIFVLNQERLYNDLLRDVPSNVHVVLLPKSGGVVERTKELRHESREQRIKE
YFYGNIRTPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKKKVVPVTPTPSLL
HHILTLSFAESTDENVIGTNVAGFCCVTEVDMERQSVMLLSPQPRPLPPNALLLWSEVQF
MDNHA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtcagaagataataataatggtagagaatatatattggatgcagactctgagctgcga
ttcgaaatcgagcaaaaagaggctaaagtgtttttgacgctcatctctgggcttgcagag
ctctttggcactgaattggtaaagaaaaagaaatatgaattcggaataggggcaaaagtg
gcgatatttacctaccaaggctgcgttctgcaagtaacgggcaaaatggatgtctgttat
atctctaaagagacaccgatgatacaatatataaactgtcatgcagcattggagcagttt
cgtattgatgccgaagaacatgataaacggggcccagttattctagtagtagggcccatg
gacgtgggaaagagtaccctctgtcgtattctgttgaactatgcagtgcgagtaggccga
agaccgctttatgcagatctcgatgtgggccaaggtgctatttcaatccctggcaatata
gctactgttctcattgaacgaccagccagtgtcgaggaaggatttgcgaaaacagcacct
ttagtttaccactttggtcacaaatctcctagtggcaacagcgtgctctataatgctgta
gtatcaaaaatggcggaagtgacactgcaatcgttagacgccaataaacgaaccaaaagc
tcaggcatcattgtcaacacgtgtggttgggttaagggctatggctacaagcacttgctg
catgcagcccgagcttatcgcgctcgtgccatttttgtattaaaccaggagcgtctgtac
aatgacctgttgcgggatgtaccgagcaatgttcatgttgtcctcttgccaaaaagtggc
ggcgtggtagagagaactaaagaattacggcatgaatcgcgcgagcaacgcataaaggaa
tatttttatggcaatatacgtacgcctttttatccattttcgtttgaagtcaaatttcaa
gatctacgtctttacaaaattggtgctcccccgttgcctgattcatgtatgcccattggt
atgaaggcggaagataacaaaaaaaaagttgtaccggttacgccgacgccatctctacta
catcacattctcacgttaagctttgcagagtctacggatgaaaatgtcattggcactaat
gttgctgggttttgttgcgttactgaagtggacatggagcgacaatctgtaatgctgctg
tcaccacagccacgtcctttgccgccgaatgcgttgttattgtggtctgaagtacagttt
atggacaatcatgcctaa

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