Dokdonia sp. Dokd-P16: DCS32_02170
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Entry
DCS32_02170 CDS
T05432
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dod
Dokdonia sp. Dokd-P16
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dod03009
]
DCS32_02170 (rimO)
Enzymes [BR:
dod01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DCS32_02170 (rimO)
Ribosome biogenesis [BR:
dod03009
]
Prokaryotic type
ribosomal protein modification factors
DCS32_02170 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
DUF6448
Motif
Other DBs
NCBI-ProteinID:
AWH75625
UniProt:
A0A2S1QGA1
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All DBs
Position
complement(479438..480790)
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AA seq
450 aa
AA seq
DB search
MRTKSLKKNKINVVTLGCSKNVYDSEVLMGQLKANEMDVAHEEEGNIVVINTCGFIDNAK
EESVNTILEYVKQKEEGEVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLKALG
ADYKHELIGERITTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSKSIEHLVIEAKKLA
ANGVTELILIAQDLTYYGLDLYKKRNLAELLENLVQVEGIEWIRLHYAFPSGFPVDVLDV
MKREPKVCNYIDIPLQHIADHILKSMRRGTTMEKTNALLDRFRESVPGMTIRTTLIVGYP
GETEEDFQLMKQWVKDQRFERLGCFTYSHEENTHAFNLEDDVPEEVKMDRANQIMEIQSQ
ISWELNQQKIGKEFKIVVDRKEGNFFIGRTEFDSPDVDNEVLVDATKFYLKTGDYAMVTI
TEAEDFDLYAEPLVALERPQALHAKRATKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcattaaaaaagaataagataaacgtagtaactctaggttgctcaaaa
aacgtttatgacagtgaggtcttaatgggccagctcaaagcaaatgagatggatgttgcc
cacgaggaagaaggtaatatcgtcgtgattaatacttgtggttttatagacaacgcaaaa
gaggagtctgtaaacactattcttgagtatgtaaagcaaaaggaagaaggagaagtagat
aaagtttttgtaacgggatgtttatctgagcgttataagccggatcttcaaaaggaaatc
ccagatgtagatcagtattttggaacaacagaattacctggattacttaaagcacttggg
gcagattataaacatgaacttataggggagcgtatcacaactactccaaaaaactatgca
tacttaaaaatagccgaaggctgtgaccgtccttgttctttctgtgcgatccctttaatg
agaggaaagcataaatcaaaatcaatagaacacttagttattgaagcaaaaaaacttgct
gcaaatggagtaacggagttaatccttattgcgcaagatcttacatattacggtcttgat
ttatacaaaaaacgtaaccttgcagagcttcttgaaaaccttgttcaggtagaaggaatt
gagtggattcgtttgcattatgcatttccttctggattcccggtagatgtacttgatgtg
atgaaacgcgagcctaaagtgtgtaattatatagatattccactgcagcatattgcagat
catattttgaagtccatgcgtcgtggtactacgatggagaaaacaaatgcgttgttagac
cgctttcgcgaaagcgtaccaggaatgaccataagaactacgcttattgttggctatcct
ggagaaacagaagaagatttccaactcatgaagcaatgggtgaaagatcaacgttttgag
cgtttaggttgttttacatattctcatgaagaaaatacacacgcatttaacttagaggac
gatgtacctgaagaagtaaaaatggatcgtgccaatcagattatggagatccaatcacaa
atctcttgggaacttaaccaacagaagatagggaaggagtttaaaattgttgtagatcgt
aaagaaggaaacttctttataggtcgtacagagtttgactcaccagacgtagataatgag
gtgctagtagatgcaacaaaattctacttaaagactggagactacgcaatggtaactatc
acagaggccgaagattttgacctttatgcagaaccacttgtagctttagagcgtccacaa
gcgctgcatgcaaagcgcgccactaaaaagtaa
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