Denitratisoma oestradiolicum: DENOEST_3907
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Entry
DENOEST_3907 CDS
T06737
Symbol
trpB
Name
(GenBank) Tryptophan synthase beta chain 2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe00260
Glycine, serine and threonine metabolism
doe00400
Phenylalanine, tyrosine and tryptophan biosynthesis
doe01100
Metabolic pathways
doe01110
Biosynthesis of secondary metabolites
doe01230
Biosynthesis of amino acids
Module
doe_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DENOEST_3907 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
DENOEST_3907 (trpB)
Enzymes [BR:
doe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
DENOEST_3907 (trpB)
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Ortholog
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Gene cluster
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
CAB1371061
UniProt:
A0A6S6XYD0
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All DBs
Position
I:complement(4079581..4080945)
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AA seq
454 aa
AA seq
DB search
MEATRIDLEQNDIPTHWYNVVADMKNPPAPPLGPDGQPVAPERMLAIFPGAILEQEMSAE
RWIPIPQEVREIYRLWRPSPLVRAVRLEQALGTPAKIFYKFEGCSPAGSHKPNSAVPQAF
YNKQAGIKRLTTETGAGQWGSSIAFAGQMFGLPVRVYMVNVSYQQKPFRRSMMQTWGAEV
YASPSQLTQTGRDALAKDPNNPGSLGLAISEAVEEAAGRPDTNYTLGSVLNHVLLHQTII
GLEAKKQFDKIGLYPDVILGPCGGGSSFGGIAFPFLADQAAGEKRAEKLRCVAVEPTSCP
TLTQGAYAYDYGDASGFTPLMKMYTLGHDFMPPGIHAGGLRYHGDSPLVSQLFHEGRVEA
VAVPQLATFEAGTLFAKAEGVIPAPESCHAIRAAIDEALKCKATGEPKVILFNLTGHGHF
DMAAYDRYFAGELDDYAYPREAVEASLQHLPQVG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaagctacccgcatcgacctggaacagaacgatatccccacccactggtacaacgtg
gtggcggacatgaagaacccaccggccccgcccctggggccggacggtcagccggtggcg
ccggaacggatgctggcgattttccccggcgccatcctggaacaggaaatgagcgccgaa
cgctggattcccatcccccaggaagtgcgcgagatctaccgcctgtggcggcccagcccc
ctggtgcgggcagtgcgcctggaacaggccctgggcaccccggcgaagattttctacaag
ttcgagggctgttcccccgccggttcccacaagcccaattccgcagtgccccaggccttc
tacaacaagcaggctggcatcaagcggctcaccaccgagaccggcgccggccagtggggg
tcctccatcgcctttgctggccagatgttcggcctgcccgtgcgggtctacatggtcaat
gtgagctaccagcagaagcccttccgccgttccatgatgcagacctggggggccgaggtc
tatgccagcccctcccaattgacccagaccggccgcgacgctttggccaaggacccgaac
aatccgggttccctgggactggccatctccgaagctgtggaagaggccgccggccggccc
gacaccaactacaccctgggttcggtgctgaaccatgtgctgctgcaccagaccatcatt
ggcctggaagcgaagaagcagttcgacaagatcggcctctatccggacgtgatcctgggt
ccctgcggcggcggctccagcttcggcggcatcgccttccccttcctggctgaccaggcg
gccggcgagaagcgggccgagaagttgcgctgcgtggcggtggagcccacctcctgcccc
accctgacccagggcgcctatgcctatgactacggcgacgcatccggcttcacgcccctg
atgaagatgtacaccctgggccacgacttcatgcccccgggcatccatgccggcggcctg
cgctatcacggggattcgcccctggtctcccagcttttccatgaaggccgggtggaagcc
gtggccgtgccccagctggccaccttcgaggctggcaccctgttcgccaaggccgaaggg
gtgatacccgcccccgaatcctgccacgccatccgcgccgccatcgatgaggccctgaag
tgcaaggccacgggagagcccaaagtgatcctgttcaacctcaccggccacggccacttc
gacatggccgcctacgaccgttatttcgctggcgagctggacgattacgcctatccccgg
gaagcggtggaagcctccctccagcacctgccccaggtgggttga
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