Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0100900-01
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Entry
Os01t0100900-01 CDS
T02163
Symbol
Os01g0100900
Name
(RAP-DB) Pyridoxal phosphate-dependent decarboxylase domain containing protein.
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00600
Sphingolipid metabolism
dosa01100
Metabolic pathways
Module
dosa_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Os01t0100900-01 (Os01g0100900)
Enzymes [BR:
dosa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
Os01t0100900-01 (Os01g0100900)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
NifW
Motif
Other DBs
RAP-DB:
Os01t0100900-01
LinkDB
All DBs
Position
chr01:join(35743..35939,36027..36072,36517..36668,36818..36877,37594..37818,37892..38033,38276..38326,38434..38525,39319..39445,39553..39568,39939..40046,40135..40189,40456..40602,40703..40781,40885..41007)
AA seq
539 aa
AA seq
DB search
MELAMDFALRLRDAANHHLSRYEPLVLLAAPLLALLAARTLHAAAAAVADRGLRTVLLAL
AMTAIKLLPGVSAYINAEKRKVVDQLQSGGTSTKSTLRTELPTVGLSNQVINDLETLKAR
DVNWQGKCSGTVYIAGSESEGHFALINKAYSMFSHTNPLHQDVFKSVAQLEAEVVAMTAA
LLGIKEKSSGGQICGNMTSGGTESILLAVKTSRDYMRTKKGITKPEMIIAESAHSAYDKA
AQYFNIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELASRY
DICLHVDLCLGGFVLPFARKLGYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNH
EIRKHQFVAVTEWTGGLYVSPTIAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKK
IQRGIEDIPGLFVIGKPDMTVVAFGSDSVDIFEVNDIMSSKGWHLNALQRPNSLHICVTL
QHTVIYEEFLKDLKDSVDTVKANPGPISGGRAPIYGAAGKMPDRGMVRELLVEFMDASC
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgccatggattttgcgctccgcctccgcgacgccgccaaccaccacctctcc
cgctacgagcctctcgtgctcctcgccgcgcccctcctcgccctcctcgctgcccgcacc
ctccacgccgccgctgccgccgtcgccgaccgcggtctccgcaccgtcctcctcgctcta
gccatgacagccatcaagttgcttccgggagttagcgcctacatcaacgctgagaagagg
aaggttgttgaccagctgcagtcaggtggcacgtccacaaaaagtactctgcggaccgag
ttgccaactgttgggctttccaaccaagtgataaacgatctcgaaacactgaaagctaga
gatgtaaactggcagggaaaatgctctggcacagtttatattgctgggagtgaatccgaa
ggtcattttgcattgataaacaaggcttactctatgttttcacacaccaacccacttcac
caggacgtattcaagagtgtggcacaattagaggctgaagtagttgcaatgacagctgct
ttgcttggcatcaaagaaaaatcatccggtggacagatttgtggtaatatgacatcgggc
ggaactgaaagcatattattagcagtaaaaacatcacgcgactatatgcgaacaaagaag
ggcattacaaagcctgaaatgataattgccgaatcagcacattctgcatacgataaagct
gctcaatatttcaatattaaagtgcggcgtgtgccagtgaacaaagagtttcttgcagat
gtgaaaggattcaaaaggtgtataaacggaaatacgataatgatggtggggtctgcacca
ggatttcctcatggtttaattgatcctattgaggaacttggggagttggcttcacgatat
gacatttgcttgcatgttgatctctgccttggtggatttgtattgcctttcgctcgtaag
cttgggtaccctattcctccattcgacttctgtgtcaagggagttacatcaatctcaact
gatgttcataagtatggattagccccaaaagggacaagcattgtcctatataaaaatcat
gaaattagaaagcatcaatttgttgctgttactgaatggactggtgggctctatgtttca
cctactattgctggaagtaggcctggtgggttgatagcgggagcttgggctgctatgacg
tctcttggactgaacggttatatggaaaatacaggtcatatcatggaagtgtcgaagaaa
atacaaagagggattgaagatatcccagggttgtttgtgattggaaagccagacatgact
gtcgtggcatttggctcagattcggttgatatatttgaggtgaacgacataatgtcatca
aaaggctggcaccttaatgctctgcagagacccaacagtttacacatttgtgtgacactg
cagcacacggtcatatatgaggaattcctgaaggatctgaaagattcagtggacactgta
aaagcaaatccagggcctattagcggggggcgagctccgatttacggagctgctggcaag
atgccggacagaggcatggtcagggagctgctggtggagttcatggacgcgtcttgctga
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