Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0783600-01
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Entry
Os01t0783600-01 CDS
T02163
Symbol
Os01g0783600
Name
(RAP-DB) Similar to Frataxin.
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Os01t0783600-01 (Os01g0783600)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dosa03029
]
Os01t0783600-01 (Os01g0783600)
Enzymes [BR:
dosa01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
Os01t0783600-01 (Os01g0783600)
Mitochondrial biogenesis [BR:
dosa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Os01t0783600-01 (Os01g0783600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frataxin_Cyay
RdRP_5
Motif
Other DBs
RAP-DB:
Os01t0783600-01
LinkDB
All DBs
Position
chr01:join(33205270..33205520,33205958..33206030,33206147..33206194,33206296..33206390,33207315..33207444)
AA seq
198 aa
AA seq
DB search
MASRKLVLGLTAARRLRSRAPVLVSSSPFLEASTSTSDATAATATRGSGLGPWGLFLSSR
ALSSTRPVSLSAGDAPGSSAADHRSILPEDEYHKLADETIHDLLEKLEEYGDSLQMDGFD
IDYGNQVLTLRLGELGTYVVNKQAPNRQIWLSSPVSGPSRFDWDAPTNCWIYRRTGANLV
ELLEKEIGELCGTPVELS
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcggaagctcgtcctcggcctcacggcggcaaggcggttgaggtctcgcgct
cccgtcctcgtctcgtcctctcccttcctggaagcctccacatcgacttctgacgccacc
gccgccaccgcgacgcggggttcggggttggggccgtgggggctgttcctatcttcgagg
gccctctcgtcgactcgtccggtgtctctgtccgccggtgatgcgcctggctcgtccgct
gcggaccacaggtcgatactaccagaggatgagtatcacaaattagcagatgagacaata
catgacctgcttgaaaaacttgaggaatatggtgactctcttcagatggatggctttgac
atagactatgggaatcaagttctaacactaaggttaggagagttggggacatatgttgta
aacaagcaagcaccaaacagacaaatttggctatcttcacctgtgagtgggccttctagg
ttcgattgggatgcaccaacaaattgttggatatacaggcggacaggagctaatcttgtt
gaacttctggagaaagagattggtgagctctgtggtaccccagtagaactttcataa
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