Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0805900-01
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Entry
Os01t0805900-01 CDS
T02163
Symbol
Os01g0805900, BETA-TUBULIN_4, TUB4
Name
(RAP-DB) Tubulin beta-2 chain (Beta-2 tubulin).
KO
K07375
tubulin beta
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04145
Phagosome
dosa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
Os01t0805900-01 (Os01g0805900)
09142 Cell motility
04814 Motor proteins
Os01t0805900-01 (Os01g0805900)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os01t0805900-01 (Os01g0805900)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dosa04812
]
Os01t0805900-01 (Os01g0805900)
04147 Exosome [BR:
dosa04147
]
Os01t0805900-01 (Os01g0805900)
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
Os01t0805900-01 (Os01g0805900)
Cytoskeleton proteins [BR:
dosa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
Os01t0805900-01 (Os01g0805900)
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Os01t0805900-01 (Os01g0805900)
Exosomal proteins of colorectal cancer cells
Os01t0805900-01 (Os01g0805900)
Exosomal proteins of bladder cancer cells
Os01t0805900-01 (Os01g0805900)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Misat_Tub_SegII
Tubulin_2
Motif
Other DBs
RAP-DB:
Os01t0805900-01
Oryzabase:
2959
LinkDB
All DBs
Position
chr01:join(34168903..34169296,34170004..34170273,34170686..34171365)
AA seq
447 aa
AA seq
DB search
MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGEYEDEEQQEADDM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcctgcacatccaaggcgggcaatgtggcaaccagatcggtgccaaattc
tgggaggtggtgtgtgatgagcatggcattgaccctaccgggcggtacacaggcaactca
gatctgcagttggagcgtgtcaatgtgtactacaatgaggcctcctgcggtcgctttgtg
cctcgtgctgttctcatggaccttgagcctggtactatggacagtgtccgcactggaccc
tatggccagatcttccgccctgacaactttgtgttcgggcaatctggtgctggtaacaac
tgggccaagggacactacactgagggtgccgagctaattgattctgttttagatgttgtg
aggaaggaggctgagaactgtgactgcctgcaaggattccaagtatgccactctcttggt
ggtggtactggatctggtatgggtacacttttgatatcaaagatcagggaggagtaccct
gaccgcatgatgctgacattctcagttttcccctcaccaaaagtatctgatactgtggtt
gagccatacaatgctacactctcagtccatcagttggttgagaatgctgatgagtgtatg
gttcttgataatgaggctctctacgacatttgcttcaggactctcaagctgaccacacct
agctttggggatttgaaccatttgatttctgccaccatgagtggagtcacatgctgccta
aggttccctggtcagttgaactctgacctccgtaagctggcagtgaaccttatccccttt
ccccgtctccacttcttcatggtcggattcgccccgctgacatcacgtggctcccagcag
taccgtgcccttactgttcctgagctcacacagcagatgtgggatgccaagaacatgatg
tgcgctgctgatcctcgccatggccgttacctcaccgcctctgccatgttccgtggaaag
atgagcaccaaggaggttgatgagcagatgatcaatgtccagaacaagaactcatcctac
ttcgtcgagtggatccccaacaatgtgaagtccagtgtctgtgacattccaccgagaggc
ctctccatggcatcgaccttcattggcaactcaacatccatccaggagatgttccggagg
gtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcactggtacactggc
gaaggcatggacgagatggagttcaccgaggcagagagcaacatgaacgaccttgtctct
gagtaccagcagtaccaggatgccaccgccgatgaggagggcgagtacgaggacgaggag
cagcaggaggctgacgacatgtaa
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integrated database retrieval system
