Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0190600-00
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Entry
Os02t0190600-00 CDS
T02163
Symbol
Os02g0190600
Name
(RAP-DB) Lycopene beta and epsilon cyclase domain containing protein.
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00906
Carotenoid biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Module
dosa_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Os02t0190600-00 (Os02g0190600)
Enzymes [BR:
dosa01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
Os02t0190600-00 (Os02g0190600)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Pyr_redox
FAD_binding_2
FAD_oxidored
Thi4
FAD_binding_3
NAD_binding_8
HI0933_like
NAD_binding_9
Pyr_redox_3
3HCDH_N
GIDA
XdhC_C
Motif
Other DBs
RAP-DB:
Os02t0190600-00
LinkDB
All DBs
Position
chr02:complement(5028913..5030382)
AA seq
489 aa
AA seq
DB search
MATTALLLRAHPSCKPPPPPSPSPRPTRALVCRAAAAGEALRSLAPPSRPELLSLDLPRY
DPARSTPVDLAVVGGGPAGLAVAQRVAEAGLSVCAIDPSPALVWPNNYGVWVDEFDAMGL
SHCLDAVWPSATVFTHDDGAAKSLHRPYARVARRKLKSTMMDRCVAHGVTFHKARVVKAV
HGEASSLLICDDGVAVPATVVLDATGFSRCLVQYDKPYDPGYQVAYGILAEVDGHPFDID
KMLFMDWRDAHLPEGSEIRERNRRIPTFLYAMPFSPTRIFLEETSLVARPGLAMDDIQER
MAARLRHLGIRVRAVEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAT
APIVADAIVRFLDTGSGDSAFAGDALSAEVWRELWPAQRRRQREFFCFGMDILLKLDLDG
TRRFFDAFFDLEPRYWHGFLSSRLFLPELAMFGLSLFAKASNTSRLEIMAKGTAPLAKMI
GNLIQDRDR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccgccctcctcctccgcgcccacccctcctgcaagccccctccccctccc
tcgccgtcgccgcgccccacgcgcgcgctcgtctgccgcgccgccgccgccggcgaggcg
ctgcggtcgctggccccgccgtcacgccccgagctgctctccctcgacctcccccgctac
gaccccgcccgctccacccccgtcgacctcgccgtcgtcggcggcggccccgccggcctc
gccgtcgcgcagcgcgtcgcggaggcgggcctctccgtctgcgccatcgacccctccccc
gccctcgtctggcccaacaactacggcgtctgggtcgacgagttcgacgccatgggactc
tcccactgcctcgacgccgtctggccctccgccaccgtcttcacccacgacgacggcgcc
gccaagtcgctccaccgcccctacgcccgcgtcgcccgccgcaagctcaagtccaccatg
atggaccgctgcgtcgcccatggcgtcacgttccacaaggccagggtcgtcaaggccgtc
cacggcgaggcatcctccctcctcatctgcgacgacggcgtcgccgtcccggccaccgtc
gtgctcgacgccacggggttctcccggtgcctcgtccagtacgacaagccgtacgacccg
gggtaccaggtcgcctatggcatcctcgccgaggtggacggacacccgttcgacatcgac
aagatgctgttcatggactggcgcgacgcgcacctccccgaggggtccgagatcagggag
cgcaaccgccgcatcccgacgttcctctacgccatgcccttctccccgacgaggatcttc
ctcgaggagacctccctcgtggcgcgcccgggcctcgccatggacgacatccaggagcgc
atggcggcgaggctgcgccacctcgggatacgcgtccgcgccgtggaggaggacgagcgg
tgcgtcatccccatgggcggcccgctcccggtgctcccgcagcgggtcgtcggcatcggc
ggcaccgccgggatggtgcacccgtccacgggctacatggtggcgcgcaccctcgccact
gcgcccatcgtggcggacgccatcgtgcgcttcctcgacaccggcagcggcgacagcgcg
ttcgccggcgacgcgctgtcggcggaggtgtggagggagctgtggccggcgcagaggagg
aggcagagggagttcttctgcttcggcatggacatcctcctcaagctcgacctcgacggc
acgcggcgattcttcgacgccttcttcgacctggagccgcgctactggcacggcttcctg
tcgtcgaggctcttcttgccggagctcgccatgttcggcctctccctcttcgccaaggcc
tccaacacgtcgcgcctcgagatcatggccaagggcaccgcccctctcgccaagatgatc
ggcaacctcatccaggacagagataggtga
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