Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0305000-01
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Entry
Os03t0305000-01 CDS
T02163
Symbol
Os03g0305000
Name
(RAP-DB) AMP-binding protein.
KO
K01913
acetate/butyrate---CoA ligase [EC:
6.2.1.1
6.2.1.2
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00010
Glycolysis / Gluconeogenesis
dosa00620
Pyruvate metabolism
dosa00630
Glyoxylate and dicarboxylate metabolism
dosa00650
Butanoate metabolism
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
dosa01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Os03t0305000-01 (Os03g0305000)
00620 Pyruvate metabolism
Os03t0305000-01 (Os03g0305000)
00630 Glyoxylate and dicarboxylate metabolism
Os03t0305000-01 (Os03g0305000)
00650 Butanoate metabolism
Os03t0305000-01 (Os03g0305000)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dosa01004
]
Os03t0305000-01 (Os03g0305000)
Enzymes [BR:
dosa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
Os03t0305000-01 (Os03g0305000)
6.2.1.2 medium-chain acyl-CoA ligase
Os03t0305000-01 (Os03g0305000)
Lipid biosynthesis proteins [BR:
dosa01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
Os03t0305000-01 (Os03g0305000)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
RAP-DB:
Os03t0305000-01
LinkDB
All DBs
Position
chr03:complement(join(10820004..10820219,10817971..10818561,10816234..10817130))
AA seq
567 aa
AA seq
DB search
MAAERDIDDLPRGGANYTALTPLWFLERAALAHPARASVVHGPVRYTWADTYRRCRRLAS
ALERRSVGHGSTVAVIAPNIPAVYEAHFGVPMAGAVVNCVNIRLNAPTVAFLLEHSSAEV
VMVDQEFFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQTCDPVSLKSALSKGAIEYEEFLE
TGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYLMSLSGALVWGMNEGAVYL
WTLPMFHCNGWCYTWTLAALCGTSICLRQVTAKAIFSAIANQGVTHFCGAPVVLNTIVNA
PPADAILPLPRVVNVMTAGAAPPPSVLASMSKLGFRITHTYGLSETYGPSTVCAWKPEWD
ELPDDERARLHARQGIRYVGLEGLDVVDPKTMAPVPADGSTLGEIVMRGNGVMKGYLKNP
RANAEAFENGWFHSGDLGVKHTDGYIEVKDRAKDIIISGGENISSLEVEKAVYQHPAVLE
ASVVARADEQWGESPCAFVTPKDGADSSDEAALAGDIMRFCRERLPGYWVPKSVVFGPLP
KTATGKIKKHELRAKAKELGPVRKSRM
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagagggacatcgacgacctgccgcgggggggcgccaactacacggcgctc
acgccgctctggttcctggagcgcgccgcgctggcgcacccggcgcgggcatccgtcgtg
cacggccccgtgcgctacacctgggccgacacctaccgccgatgccgccgcctcgcctcc
gccctcgagcgccggtccgtcggccacgggagcacggtagctgtaatagctccaaatatc
ccagcagtatatgaggcccattttggagttccaatggctggagcagtggtgaactgcgtc
aacattcgattaaatgctcctactgttgcatttctcttggagcactcatcagcggaagtt
gtgatggttgaccaggaatttttctccctagcagaggattctctgaggattattgcggag
caaaagaaaggagctttcaaacagccacttctaattgttattggtgatcaaacttgtgat
cccgtgtccctcaaaagtgctttgagtaaaggagccattgagtatgaggagtttctggaa
actggcgatcctgaatttgcctggaaaccaccacaggatgaatggaagagtattgcctta
ggttatacttccgggacaacttccaacccaaagggcgtggtactgcatcacaggggtgct
tacctaatgtcactgagtggtgctctggtatggggaatgaatgaaggcgctgtttatttg
tggactttgccgatgttccactgtaatggctggtgctatacatggacacttgctgctctt
tgtggaacaagcatttgtcttcgtcaggttacagcaaaggccatcttctcggcgatagcc
aaccaaggcgtgacccacttctgtggtgcaccggttgtcctcaacaccatcgtcaacgct
ccgccggctgacgccatcctccccctgccgcgtgtcgtcaacgtcatgaccgccggcgcc
gcgccgccgccgtcggtgctcgcgtccatgtcgaagctcggtttccgcatcacccacacc
tacgggctgtccgagacgtacggcccgtccacggtgtgcgcgtggaagccggagtgggac
gagctgccggacgacgagcgcgcccgcctccacgcccgccagggcatccgctacgtgggc
ctcgagggcctcgacgtcgtcgacccgaagacgatggcgcccgtccccgccgacggctcg
acgctcggggagatcgtcatgcgcgggaacggcgtcatgaaggggtacctcaagaacccc
agggcgaacgcggaggcgttcgagaacgggtggttccactccggcgacctcggcgtgaag
cacaccgacgggtacatcgaggtgaaggacagggctaaggacatcatcatctccggcggg
gagaacatcagcagcctggaggtggagaaggcggtgtaccagcacccggcggtgctggag
gcgtcggtggtggcgcgggccgacgagcagtggggggagtcgccatgcgcgttcgtgacg
cccaaggacggcgccgacagctccgacgaggcggcactcgccggcgacatcatgcggttc
tgccgggagaggctgccggggtactgggtgcccaagtccgtcgtgttcgggccgctgccc
aagacggcgacggggaagatcaagaagcacgagctgagggccaaggccaaggaattgggc
ccggtccggaagagcaggatgtga
DBGET
integrated database retrieval system
