KEGG T02163: Os03t0403100-01

Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0403100-01

Entry

Os03t0403100-01   CDS       T02163

Symbol

Os03g0403100

Name

(RAP-DB) Similar to DNA-directed RNA polymerase subunit.

K03021

DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]

Organism

dosa Oryza sativa japonica (Japanese rice) (RAPDB)

Pathway

dosa03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:dosa00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Os03t0403100-01 (Os03g0403100)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os03t0403100-01 (Os03g0403100)
Enzymes [BR:dosa01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Os03t0403100-01 (Os03g0403100)
Transcription machinery [BR:dosa03021]
Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     Os03t0403100-01 (Os03g0403100)

SSDB

Motif

Pfam:

RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5

Other DBs

RAP-DB:

Os03t0403100-01

LinkDB

Position

chr03:join(16421167..16421174,16421263..16421392,16421512..16421631,16421741..16421835,16422330..16422396,16422555..16422645,16422736..16422788,16422962..16423026,16424088..16424193,16426799..16426909,16427356..16427415,16427776..16427805,16428037..16428087,16428156..16428254,16428588..16428647,16428712..16428801,16429189..16429290,16429373..16429483,16429589..16429705,16430130..16430246,16430331..16430411,16431082..16431186,16431267..16431347,16431429..16431572,16431654..16431698,16431973..16432053,16432127..16432266,16432383..16432482,16433014..16433132,16433330..16433465,16433549..16433679,16434615..16434740,16434816..16434871,16435947..16436017,16437716..16437800,16437881..16437984,16438647..16438775,16439066..16439116)

AA seq 1155 aa
MERTEEEEAPAAKDPNASLPSPTYRSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNY
FITKGIRNIVKANNRIEARNNPSIFLRYNSVRVGVPSVQVQYIAEKITPHFCRLTDRTYS
APVLADIEYTVGKQYELKRKPNFIIGYLPIMLRSHACVLNGKDEAELARYGECPLDPGGY
FIVKGTEKVILIQEQLSKNRIIIDTDSKGRVIASVTSSTHEIKSKTVIFMEKEKIYLQLN
QFTKPIPIIVVMKAMGMESDQEVAQMVGRDPRYGDLLYPSIQECAFERIYTQKQALQYMD
DKVMYPGAGNQKEGRSKSILRDVFVAHVPVESGNFRPKCIYTAVMLRRMMDAILNADTFD
DKDYVGNKRLELSGQLISLLFEDLFKTMNSNAVELMNKTSEKIHSSPLDLSLHIKENIIT
HGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFEKTRKTSGPRALQ
PSQWGMLCPCDTPEGEACGLTKNLALLTHVTTDQEEGPLMNLCYSLGVEDLSLLSGEEIH
ASGSFLVMFNGLILGKHRQPQRFANAMRKLRRSGIIGEFVSIFVNEKQHCIHIASDGGRV
CRPLIIADKGIPRVKEHHMKQLRDGIRSFDDFLRDGLIEYLDVNEENNALIALYEHEDQD
DVQRSSITHIEIEPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRADS
LLYLLVYAQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
RCIAMKKYTVTKEKYEGGYSDRIVKPQRDKDGALLKQNMRALDEDGFAAPGLIIRNHDIY
VNKQTPRNTKRDSGAHLTDRDYKDSPAVYKGVDGETTVVDRVMLCSDTDEKLIIKCIIRH
TRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELL
GGKAGVSCGQFHYGSAFGEPSGNADKVEDISRTLVKHGFSYNGKDLLYSGILGHPCQAYV
FMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGASM
LIFERLLISSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLFQE
LQAMNVVPRLKLTEG

NT seq 3468 nt +upstreamnt +downstreamnt
atggaacgcactgaggaggaggaggcgcccgccgccaaggaccccaacgcgtcgctgccg
tcgccgacgtacaggtcgctcgccgcgcccgtcaccaagcccgtcgacaagttcgcgctc
cttcctgccttcctcaaggttagaggcctcgttaaggagcacatcgactccttcaactac
ttcatcaccaagggaattaggaacattgtcaaggcaaacaatcgcatcgaagcgcgcaac
aacccctctatttttcttaggtacaatagtgtaagggttggtgtgccctccgtacaagta
caatacatcgctgaaaaaatcacgccacacttttgccgccttaccgatcgcacatactct
gctcctgtgttggctgatattgaatacacagttggaaagcagtatgagctgaaaaggaag
cctaatttcatcattgggtacttgccaattatgcttagaagtcatgcatgcgttctgaat
ggaaaggatgaagctgaattagcaagatatggtgagtgccctcttgatcctggtggttac
ttcattgttaagggaaccgagaaggtcattcttatacaagaacagctatcaaagaatcgt
attattatcgacaccgatagtaaaggaagggtgattgcatctgttacgagcagcacacat
gaaataaaaagcaaaactgtgatttttatggagaaggagaaaatttatctacagttgaat
caattcactaagccgatacctataattgtggttatgaaagcgatggggatggaaagtgac
caagaggttgcacaaatggtcggaagagatccaagatatggagatctcctatatccatct
attcaggaatgtgcctttgagagaatctatacacagaagcaagctctgcagtacatggat
gacaaggtgatgtatcctggtgcaggaaatcagaaggaaggtcgttcaaaatcaatcctc
cgtgatgtttttgttgcacatgttccggttgaaagcgggaatttccgaccaaagtgcata
tacacagctgttatgttaaggcgcatgatggatgcaatcttgaatgccgacacttttgat
gataaggattatgtaggaaataagaggctagagctgtctggtcaactaatatccctgctt
tttgaggatttgttcaaaacgatgaactccaatgctgtggagcttatgaacaaaacaagt
gaaaagatccattctagcccattggatttaagcctgcatataaaggaaaatatcataacc
catggtttggagagggctatttccacaggaaattgggatattaaacgatttaggatgcat
agaaaaggtgtatcacaggttctttcaagattatcctacatggcatctttaggctatatg
acaaggataacaccacaatttgagaagacccggaaaacaagtggacctcgtgctttgcag
cctagtcagtggggtatgctttgtccatgtgatactcctgaaggggaggcttgtggcttg
acaaaaaatttagctttgttgacccacgttacaacagatcaagaggaaggcccactcatg
aatctctgttatagtctaggtgtggaagatttatcacttctgtctggagaagaaatccat
gcatcgggttcgtttttggtcatgttcaatgggttaatactggggaaacacagacaacct
cagagatttgctaatgctatgagaaaattgcgtcgttcgggtataattggagagttcgta
agcatttttgtaaacgagaagcagcattgcattcacattgcctctgatggcggtcgtgtc
tgtcgcccacttataattgctgataaggggataccaagagtcaaagagcatcatatgaaa
caattgagagatggtattcgttcgtttgatgattttctgcgtgatgggttgatcgaatat
cttgacgttaatgaagaaaacaatgcattgattgccctgtatgagcatgaggatcaagat
gatgttcaaagaagcagtatcacacatattgaaatagagcccttgaccattttaggggtt
gtagctggacttattccttatccacatcataaccagtctccccgtaacacttaccagtgt
gcaatgggtaagcaagcaatgggaaatatcgcgtataatcagttattccgagcagattct
ctactctatttactagtgtatgcacagcgtccccttcttacaacaaaaactattgagttg
gttggatatgataagcttggggctggacagaatgcaactgttgctgtcatgagttatagt
ggatacgatattgaagatgcaattgtaatgaacaaatcatcccttgaccgaggttttggt
cgttgcattgcaatgaaaaagtacactgtgacaaaggagaagtatgaaggtggttattca
gacaggatcgttaagccccagagggataaagatggtgctctgttaaaacagaacatgcgg
gcattggatgaagatggatttgctgcaccaggtctaataatacgcaatcatgatatctat
gtgaacaagcaaactcccagaaataccaagagagattctggtgctcatttaacagacagg
gactataaggactcgcctgctgtctacaaaggtgttgatggcgagaccactgttgtagat
cgtgtaatgctttgttcagatacagatgagaaattaatcatcaaatgtattatccgtcac
actaggcgtccagaggttggtgacaaattcagtagcagacatggacagaaaggtgtttgt
ggtaccattgttcagcaggaagacttccccttctctgagagaggaatatgccctgatttg
attatgaatccccatggatttccaagtcgaatgacaataggtaaaatgattgaacttctt
ggggggaaggctggcgtatcttgtggtcaatttcattatggcagtgcatttggggaacca
agtggtaatgctgataaggttgaagatataagccgtactctggtaaagcatggcttcagc
tataatggaaaagatctcttgtactcaggaattttaggccatccttgtcaggcatatgta
ttcatggggccaatctactaccagaagttgaagcacatggttcttgataagatgcatgct
cgagctagtggaccacgagtattgctgacccggcaacctactgaagggcgaagtcgtgat
ggaggcctacgtcttggtgagatggagcgtgactgtttaatcgcatacggtgctagcatg
ctaatctttgaacgtctactaatatctagtgatccatatcaagtacaggtttgcagaaaa
tgtggcttgttaggctattacaatcataaactgaaggcttcctactgttccatgtgcaaa
aatggagaaaatatggccaagatgaggatgccgtatgcttgcaagcttttattccaggag
ctgcaagcaatgaacgttgttccacgattgaagttaactgaaggataa

DBGET integrated database retrieval system