KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0586600-01
Entry
Os03t0586600-01   CDS       T02163                                 
Symbol
Os03g0586600
Name
(RAP-DB) Similar to DNA-DIRECTED RNA POLYMERASES I, II, AND III 15 KD POLYPEPTIDE(RPABC6).
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020  RNA polymerase
dosa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Os03t0586600-01 (Os03g0586600)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Os03t0586600-01 (Os03g0586600)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os03t0586600-01 (Os03g0586600)
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os03t0586600-01 (Os03g0586600)
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Os03t0586600-01 (Os03g0586600)
  RNA polymerase III system
   RNA polymerase III
     Os03t0586600-01 (Os03g0586600)
  RNA polymerase I system
   RNA polymerase I
     Os03t0586600-01 (Os03g0586600)
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Os03t0586600-01 (Os03g0586600)
SSDB
Motif
Pfam: RNA_pol_Rpb6 Merozoite_SPAM
Other DBs
RAP-DB: Os03t0586600-01
LinkDB
Position
chr03:complement(join(21641088..21641122,21639749..21639782,21639502..21639671,21639357..21639408,21637929..21637996,21637778..21637847))
AA seq 142 aa
MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNEDGPDEVVGAEAEDKEQEKTQRPRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGG
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggacgacgactacaacgacatggacatggggtatgaggatgagccaccagaacct
gagattgaggaaggggctgaagaggaacctgagaataacgaggatggccctgatgaggtt
gtaggggcagaggctgaagataaggaacaagaaaaaactcagcgcccacgcaaaacgtca
aagtatatgacaaagtatgagcgtgcccgcatcctgggtacacgtgcattacagataagc
atgaatgctccagttatggttgagcttgagggagaaactgatcctcttgagattgccatg
aaagagctgagagcacgcaagatcccattcacaattaggcggtacttacctgacggaagc
tatgaggactggggcgttgacgagcttattgtggaggactcctggaaacgccaggttgga
ggcggctaa

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