Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0551200-01
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Entry
Os04t0551200-01 CDS
T02163
Symbol
Os04g0551200
Name
(RAP-DB) Similar to Cytoplasmic malate dehydrogenase.
KO
K00025
malate dehydrogenase [EC:
1.1.1.37
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00020
Citrate cycle (TCA cycle)
dosa00270
Cysteine and methionine metabolism
dosa00620
Pyruvate metabolism
dosa00630
Glyoxylate and dicarboxylate metabolism
dosa00710
Carbon fixation in photosynthetic organisms
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
dosa01200
Carbon metabolism
Module
dosa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dosa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dosa_M00012
Glyoxylate cycle
dosa_M00168
CAM (Crassulacean acid metabolism), dark
dosa_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Os04t0551200-01 (Os04g0551200)
00620 Pyruvate metabolism
Os04t0551200-01 (Os04g0551200)
00630 Glyoxylate and dicarboxylate metabolism
Os04t0551200-01 (Os04g0551200)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Os04t0551200-01 (Os04g0551200)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Os04t0551200-01 (Os04g0551200)
Enzymes [BR:
dosa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
Os04t0551200-01 (Os04g0551200)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
AMPK_alpha_AID
Motif
Other DBs
RAP-DB:
Os04t0551200-01
LinkDB
All DBs
Position
chr04:join(27605224..27605329,27605439..27605597,27605676..27605851,27607128..27607405,27607481..27607616,27607706..27607817,27607899..27607990)
AA seq
352 aa
AA seq
DB search
MMSSNSLFQRLAKWCPWLLRDEPKKPVKVLVTGAAGQIGYAIVAMIARGLMLGADQPVVL
HLLDLPVAANALNGVRMELIDAALPLLRGVVATSDEAEAFKGVNVAIVIGGWPRRDGMER
KDLISKNVTIYKSQASALHQHAAPNCKVLVVANPANTNALVLKEFAPAIPAKNITCLTRL
DHNRALGQVAEKLNVHVGDVKNAIIWGNHSSTQFPDASHATVSTDRGERPVRELIADEIW
LREEFVTDVQQRGAAVIKARKQSSSLSAASAACDHMRDWILGTPKGTWVSMGVYSDGSYG
VPEGVFFSFPVTCEKGEWSVVQGLEIDDFARSKMETSATELKEEKSIAYEFL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatccaattccctcttccagcgtctggcaaaatggtgcccgtggttactgaga
gatgagccgaagaagcctgtcaaggttcttgtcaccggcgccgcagggcaaatagggtat
gccattgtcgcgatgatcgcgaggggcctcatgctaggagccgaccagccggtggtgctc
cacctgctggatctgccggtcgcggccaatgctctgaacggcgtcaggatggaactgatc
gacgctgcgctgccgctgctcagaggagtggtggcgacgagtgacgaggctgaggcgttc
aagggcgtcaacgtcgccatcgtcatcggtggatggccgaggagagacgggatggagagg
aaagatttgattagcaagaacgtgacaatctacaaatcccaggcctctgcgctccatcag
cacgccgccccaaactgcaaggtcttggtcgtggccaatcccgcgaacaccaacgcgctc
gtcctgaaggagttcgccccggcaatcccggccaagaacatcacctgcctcaccaggctc
gaccacaaccgcgccctcggccaggtcgccgagaagctgaacgtgcacgtcggcgacgtc
aagaacgccatcatatggggcaaccactcctccacgcagttccccgacgccagccacgcc
accgtctcgaccgaccgcggcgagaggcccgtcagggagctcatcgccgacgagatatgg
ctgagggaggagttcgtcaccgacgtgcagcagcgaggcgcggcggtgatcaaggcgcgg
aagcagtcgagctcgctgtccgccgccagcgcggcatgcgaccacatgagagactggatc
cttggaaccccaaagggtacgtgggtgtccatgggcgtttactctgacggcagctatggc
gtccccgagggcgtcttcttctcgtttccggtgacctgcgagaagggggagtggtctgtc
gtgcagggtcttgagattgacgactttgcacgctccaagatggaaacctcggcgaccgag
ctcaaggaagagaagtccattgcttatgagtttctctga
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